RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 RIN1Q13671 783 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 TAF11Q15544 211 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 PCGF3Q3KNV8 242 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 PHYHD1Q5SRE7 291 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 FAM120AOSQ5T036 256 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 NANOGNBQ7Z5D8 188 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 COMTD1Q86VU5 262 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 SLC22A24Q8N4F4 322 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 PCYOX1LQ8NBM8 494 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 OR10A6Q8NH74 314 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 SNX33Q8WV41 574 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 RDH5Q92781 318 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 ZNF837Q96EG3 531 aaPredicted RBP7.55□□□□□ -1.2
NUP50-217ENST00000491860 TXNDC15Q96J42 360 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 ECSITQ9BQ95 431 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 ZNF426Q9BUY5 554 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 ZNF416Q9BWM5 594 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 BCL2L14Q9BZR8 327 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 CHODLQ9H9P2 273 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 SEC61A2Q9H9S3 476 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 SMURF2Q9HAU4 748 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 NPHS2Q9NP85 383 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 GID8Q9NWU2 228 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 SLCO1C1Q9NYB5 712 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 SLC7A7Q9UM01 511 aa7.55□□□□□ -1.2
NUP50-217ENST00000491860 SH3PXD2BA1X283 911 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 ZNF503-AS2A6NEH8 195 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 B4DSR2 109 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 MCIDASD6RGH6 385 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 DHHO43323 396 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 SEC14L2O76054 403 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 SNAP29O95721 258 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 TFP02787 698 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 MT-ND1P03886 318 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 OPN1SWP03999 348 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 PGA4P0DJD7 388 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 PGA3P0DJD8 388 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 ANPEPP15144 967 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 GUCA1AP43080 201 aaPredicted RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 GPR6P46095 362 aaPredicted RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 DVL1P1P54792 670 aaPredicted RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 TAS2R41P59536 307 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 TEKQ02763 1124 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 PIGFQ07326 219 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 FXNQ16595 210 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 TBC1D28Q2M2D7 210 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 ANKDD1AQ495B1 522 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 RGS7BPQ6MZT1 257 aaPredicted RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 SLC16A14Q7RTX9 510 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 MYPOPQ86VE0 399 aaPredicted RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 CDK20Q8IZL9 346 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 RFLNBQ8N5W9 214 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 SLC30A7Q8NEW0 376 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 GPR32P1Q8NGA4 272 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 VANGL1Q8TAA9 524 aaPredicted RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 LIPHQ8WWY8 451 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 C11orf40Q8WZ69 217 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 TAMM41Q96BW9 452 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 LRRC58Q96CX6 371 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 C1orf159Q96HA4 380 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 ZNF75AQ96N20 296 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 RSPO3Q9BXY4 272 aaPredicted RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 MRPL37Q9BZE1 423 aaKnown RBP7.54□□□□□ -1.2
NUP50-217ENST00000491860 RNF121Q9H920 327 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 CDH20Q9HBT6 801 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 TMEM38BQ9NVV0 291 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 TAS2R5Q9NYW4 299 aa7.54□□□□□ -1.2
NUP50-217ENST00000491860 A0A1W2PPW3 197 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 LRRN3E7EW58 273 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 BLOC1S5-TXNDC5H3BN57 136 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 SLC22A2O15244 555 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 LILRA1O75019 489 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 OR7A10O76100 309 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 QDPRP09417 244 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 FUT1P19526 365 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 SRP14P37108 136 aaKnown RBP7.53□□□□□ -1.2
NUP50-217ENST00000491860 LIPAP38571 399 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 ZNF133P52736 654 aaPredicted RBP7.53□□□□□ -1.2
NUP50-217ENST00000491860 CDH15P55291 814 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 KLF3P57682 345 aaPredicted RBP7.53□□□□□ -1.2
NUP50-217ENST00000491860 RAB39AQ14964 217 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 HIST3H3Q16695 136 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 NKPD1Q17RQ9 610 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 CR1LQ2VPA4 569 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 KRTAP24-1Q3LI83 254 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 FAM205BPQ63HN1 556 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 NANOGP8Q6NSW7 305 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 TMEM154Q6P9G4 183 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 ARPINQ7Z6K5 226 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 GLCCI1Q86VQ1 547 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 RETREG3Q86VR2 466 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 CARM1Q86X55 608 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 SKA3Q8IX90 412 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 RBM15BQ8NDT2 890 aaKnown RBP7.53□□□□□ -1.2
NUP50-217ENST00000491860 CPEB3Q8NE35 698 aaKnown RBP7.53□□□□□ -1.2
NUP50-217ENST00000491860 NOXO1Q8NFA2 376 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 ZNF519Q8TB69 540 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 TMEM239Q8WW34 195 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 LZICQ8WZA0 190 aa7.53□□□□□ -1.2
NUP50-217ENST00000491860 SGTBQ96EQ0 304 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms