RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TSPAN19P0C672 248 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 OR8G3PP0DMU2 310 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 FUT4P22083 530 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 NR4A1P22736 598 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 PDLIM4P50479 330 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 SEC24CP53992 1094 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 HDDC2Q7Z4H3 204 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 OFCC1Q8IZS5 231 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 MCHR2Q969V1 340 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 TNFRSF13CQ96RJ3 184 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 MRPL13Q9BYD1 178 aaKnown RBP27.1■■□□□ 1.93
LDB1-204ENST00000490751 RHCGQ9UBD6 479 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 FBXO9Q9UK97 447 aaPredicted RBP27.1■■□□□ 1.93
LDB1-204ENST00000490751 CHD3Q12873 2000 aaKnown RBP27.09■■□□□ 1.93
LDB1-204ENST00000490751 TLX2O43763 284 aaPredicted RBP27.09■■□□□ 1.93
LDB1-204ENST00000490751 ENTPD5O75356 428 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 IFI30P13284 250 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 ZNF35P13682 527 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 LSM11P83369 360 aaKnown RBP eCLIP27.09■■□□□ 1.93
LDB1-204ENST00000490751 MYBPC1Q00872 1141 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 RAB39AQ14964 217 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 HIST3H3Q16695 136 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 TMEM249Q2WGJ8 235 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 CBLL1Q75N03 491 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 SYT14Q8NB59 555 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 GEMIN6Q8WXD5 167 aaKnown RBP27.09■■□□□ 1.93
LDB1-204ENST00000490751 SEPHS2Q99611 448 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 DOK1Q99704 481 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 SH3GL3Q99963 347 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 YAE1D1Q9NRH1 226 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 FBXL3Q9UKT7 428 aa27.09■■□□□ 1.93
LDB1-204ENST00000490751 YLPM1P49750 1951 aaKnown RBP27.09■■□□□ 1.93
LDB1-204ENST00000490751 SONP18583 2426 aaKnown RBP27.08■■□□□ 1.93
LDB1-204ENST00000490751 TMEM129A0AVI4 362 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 J3KTA2 159 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 CRLF1O75462 422 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 TRMUO75648 421 aaKnown RBP27.08■■□□□ 1.93
LDB1-204ENST00000490751 FARS2O95363 451 aaKnown RBP27.08■■□□□ 1.93
LDB1-204ENST00000490751 ACADSP16219 412 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 LAPTM4AQ15012 233 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 IFI44LQ53G44 452 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 PRIMA1Q86XR5 153 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 OR4K5Q8NGD3 323 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 BPIFA2Q96DR5 249 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 FNDC11Q9BVV2 318 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 FAM107BQ9H098 131 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 RAB1BQ9H0U4 201 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 MYLK2Q9H1R3 596 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 CMAHPQ9Y471 501 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 SPEF1Q9Y4P9 236 aa27.08■■□□□ 1.93
LDB1-204ENST00000490751 CENPBD1B2RD01 187 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 ARMC4Q5T2S8 1044 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 ZNF584Q8IVC4 421 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 CDK20Q8IZL9 346 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 HSH2DQ96JZ2 352 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 DYNLRB1Q9NP97 96 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 MYOZ1Q9NP98 299 aaPredicted RBP27.07■■□□□ 1.92
LDB1-204ENST00000490751 MAN2C1Q9NTJ4 1040 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 HIF3AQ9Y2N7 669 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 ABCA2Q9BZC7 2435 aa27.07■■□□□ 1.92
LDB1-204ENST00000490751 JMJD1CQ15652 2540 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 HTR3EA5X5Y0 456 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 NDUFAB1O14561 156 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 SERPINA1P01009 418 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 ZNF84P51523 738 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 TRAM2Q15035 370 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 CARTPTQ16568 116 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 MSMPQ1L6U9 139 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 ALG10Q5BKT4 473 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 CMTM5Q96DZ9 223 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 KCTD14Q9BQ13 255 aaPredicted RBP27.06■■□□□ 1.92
LDB1-204ENST00000490751 PIMREGQ9BSJ6 248 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 STX18Q9P2W9 335 aaKnown RBP27.06■■□□□ 1.92
LDB1-204ENST00000490751 ABCD2Q9UBJ2 740 aa27.06■■□□□ 1.92
LDB1-204ENST00000490751 SH3PXD2BA1X283 911 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 NPIPB13A6NJU9 1138 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 VWC2LB2RUY7 222 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 NPIPB4C9JG80 1138 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 NDUFS8O00217 210 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 FFAR1O14842 300 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 SERPINA5P05154 406 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 PSME3P61289 254 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 GALK2Q01415 458 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 FKBP9P1Q75LS8 142 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 NRMQ8IXM6 262 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 ZCCHC24Q8N2G6 241 aaKnown RBP27.05■■□□□ 1.92
LDB1-204ENST00000490751 FAM162AQ96A26 154 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 MRPL24Q96A35 216 aaKnown RBP27.05■■□□□ 1.92
LDB1-204ENST00000490751 RNF121Q9H920 327 aa27.05■■□□□ 1.92
LDB1-204ENST00000490751 SAGP10523 405 aaPredicted RBP27.04■■□□□ 1.92
LDB1-204ENST00000490751 NCK1P16333 377 aa27.04■■□□□ 1.92
LDB1-204ENST00000490751 MAKP20794 623 aa27.04■■□□□ 1.92
LDB1-204ENST00000490751 USF1P22415 310 aaPredicted RBP27.04■■□□□ 1.92
LDB1-204ENST00000490751 LSP1P33241 339 aa27.04■■□□□ 1.92
LDB1-204ENST00000490751 GLRXP35754 106 aa27.04■■□□□ 1.92
LDB1-204ENST00000490751 ZNF133P52736 654 aaPredicted RBP27.04■■□□□ 1.92
LDB1-204ENST00000490751 VLDLRP98155 873 aa27.04■■□□□ 1.92
LDB1-204ENST00000490751 TOP3AQ13472 1001 aaPredicted RBP27.04■■□□□ 1.92
LDB1-204ENST00000490751 NRN1LQ496H8 165 aa27.04■■□□□ 1.92
LDB1-204ENST00000490751 GKAP1Q5VSY0 366 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms