RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 NMD3Q96D46 503 aaKnown RBP12.6□□□□□ -0.39
VPS26A-205ENST00000489656 TUBA1CQ9BQE3 449 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 PRORYQ9H606 182 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 MARCH7Q9H992 704 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 ADGRL4Q9HBW9 690 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 ACOT13Q9NPJ3 140 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 INPP5EQ9NRR6 644 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 TNFRSF10DQ9UBN6 386 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 B9D1Q9UPM9 204 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 RCE1Q9Y256 329 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 ZNF175Q9Y473 711 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 FLVCR1Q9Y5Y0 555 aa12.6□□□□□ -0.39
VPS26A-205ENST00000489656 PRRC2CQ9Y520 2896 aaKnown RBP12.59□□□□□ -0.39
VPS26A-205ENST00000489656 ZNF726A6NNF4 738 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 DCTN6O00399 190 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 ZNF432O94892 652 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 ZNF133P52736 654 aaPredicted RBP12.59□□□□□ -0.39
VPS26A-205ENST00000489656 CLDN17P56750 224 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 SRYQ05066 204 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 RASGEF1BQ0VAM2 473 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 THEM4Q5T1C6 240 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 ADGRE4PQ86SQ3 457 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 GHDCQ8N2G8 530 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 PROKR2Q8NFJ6 384 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 OR51G2Q8NGK0 314 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 ZNRF4Q8WWF5 429 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 ROBO4Q8WZ75 1007 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 TMEM45BQ96B21 275 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 CRELD1Q96HD1 420 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 TSSK2Q96PF2 358 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 CNN2Q99439 309 aaKnown RBP12.59□□□□□ -0.39
VPS26A-205ENST00000489656 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 NUAK2Q9H093 628 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 CAMK2AQ9UQM7 478 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 COMMD3-BMI1R4GMX3 469 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
VPS26A-205ENST00000489656 TMEM129A0AVI4 362 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 A6NHS1 94 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 GPR171O14626 319 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 CTLA4P16410 223 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 MYL12AP19105 171 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 PYCR1P32322 319 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 PTGS2P35354 604 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 MAP2K4P45985 399 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 CLRN1P58418 232 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ACTC1P68032 377 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ACTA1P68133 377 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 RNPS1Q15287 305 aaKnown RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 NEDD8Q15843 81 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 NADK2Q4G0N4 442 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 SYT6Q5T7P8 510 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ZNF324BQ6AW86 544 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 CHMP1BQ7LBR1 199 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 TMEM123Q8N131 208 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ACBD7Q8N6N7 88 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 NANOGP1Q8N7R0 232 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 Q8NA96 180 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 OR51L1Q8NGJ5 315 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 OR6K6Q8NGW6 343 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 RORBQ92753 470 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 TMEM54Q969K7 222 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 INTS12Q96CB8 462 aaKnown RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ZMYND19Q96E35 227 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 GPR137Q96N19 417 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ZNF385AQ96PM9 386 aaKnown RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 RBP7Q96R05 134 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 OR2M2Q96R28 347 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ARHGAP9Q9BRR9 750 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ZNF649Q9BS31 505 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 MND1Q9BWT6 205 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 BCO1Q9HAY6 547 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 GP6Q9HCN6 339 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 SRA1Q9HD15 236 aaKnown RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 KLHL9Q9P2J3 617 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ING1Q9UK53 422 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 ERGIC3Q9Y282 383 aa12.58□□□□□ -0.4
VPS26A-205ENST00000489656 LSM2Q9Y333 95 aaKnown RBP12.58□□□□□ -0.4
VPS26A-205ENST00000489656 PIEZO2Q9H5I5 2752 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 DPPA5A6NC42 116 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 ZNF724A8MTY0 619 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 ZNF99A8MXY4 864 aaPredicted RBP12.57□□□□□ -0.4
VPS26A-205ENST00000489656 SLC16A7O60669 478 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 KHDRBS3O75525 346 aaKnown RBP12.57□□□□□ -0.4
VPS26A-205ENST00000489656 APOL3O95236 402 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 OR2T7P0C7T2 308 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 FAM87AP0C7U9 286 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 LIMS3P0CW19 117 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 LIMS4P0CW20 117 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 FCGR2AP12318 317 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 TTKP33981 857 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 CAMK2DQ13557 499 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 C3AR1Q16581 482 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 KRTCAP3Q53RY4 240 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 SLC25A47Q6Q0C1 308 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 FAM180AQ6UWF9 173 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 B3GLCTQ6Y288 498 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 ZNF367Q7RTV3 350 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 SLC16A9Q7RTY1 509 aa12.57□□□□□ -0.4
VPS26A-205ENST00000489656 TIGD4Q8IY51 512 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms