RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 OR8J1Q8NGP2 316 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 OR6X1Q8NH79 312 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 CNIH3Q8TBE1 160 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ASB10Q8WXI3 467 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF566Q969W8 418 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 SLC25A44Q96H78 314 aaPredicted RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 OR2M2Q96R28 347 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
CLDN11-209ENST00000489485 SPTBN1Q01082 2364 aaKnown RBP12.61□□□□□ -0.39
CLDN11-209ENST00000489485 EEF1E1-BLOC1S5C9J1V9 151 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 IMPA2O14732 288 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 EEF1E1O43324 174 aaKnown RBP12.6□□□□□ -0.39
CLDN11-209ENST00000489485 SLC43A1O75387 559 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 KRT33AO76009 404 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF432O94892 652 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 TXNDC12O95881 172 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 IFNGP01579 166 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF3P17036 446 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 CDKN2AP42771 156 aaKnown RBP12.6□□□□□ -0.39
CLDN11-209ENST00000489485 EFNB1P98172 346 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 CD47Q08722 323 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 CRMP1Q14194 572 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 LEG1Q6P5S2 330 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 LUZP2Q86TE4 346 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 JAZF1Q86VZ6 243 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 LIX1LQ8IVB5 337 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 SYT14Q8NB59 555 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 OR6N1Q8NGY5 312 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF519Q8TB69 540 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 TRUB1Q8WWH5 349 aaKnown RBP12.6□□□□□ -0.39
CLDN11-209ENST00000489485 YIPF3Q9GZM5 350 aa12.6□□□□□ -0.39
CLDN11-209ENST00000489485 OR6C68A6NDL8 312 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 J3QKU1 62 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 ZG16O60844 167 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 IL18BPO95998 194 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 IGHG1P01857 330 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 CHRNB4P30926 498 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 OR3A2P47893 321 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 CLRN1P58418 232 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 ITGADQ13349 1161 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 MAD2L1BPQ15013 274 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-209ENST00000489485 PLBD1Q6P4A8 553 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 SLC37A3Q8NCC5 494 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 RHOXF1Q8NHV9 184 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 TMEM163Q8TC26 289 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 CA5BP1Q8WTZ4 195 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 LRR1Q96L50 414 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 OPN3Q9H1Y3 402 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-209ENST00000489485 SLCO5A1Q9H2Y9 848 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 MED20Q9H944 212 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 UPB1Q9UBR1 384 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 PRSS50Q9UI38 385 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 HSPE1-MOB4S4R3N1 261 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 A6NIZ1 184 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 M0R3G1 203 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 TRMUO75648 421 aaKnown RBP12.59□□□□□ -0.39
CLDN11-209ENST00000489485 CD8BP10966 210 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 GABRB1P18505 474 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 RAP1BP61224 184 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 RAP1AP62834 184 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 LGALS3BPQ08380 585 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 TSPO2Q5TGU0 170 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 FAM205BPQ63HN1 556 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 TFAP2EQ6VUC0 442 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 MRGPRGQ86SM5 289 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 TMEM123Q8N131 208 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 GPR137CQ8N3F9 429 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 ZNF610Q8N9Z0 462 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 NPEPL1Q8NDH3 523 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 APH1BQ8WW43 257 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 HDAC2Q92769 488 aaKnown RBP12.59□□□□□ -0.39
CLDN11-209ENST00000489485 PTP4A1Q93096 173 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 ALKBH3Q96Q83 286 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-209ENST00000489485 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 SYT4Q9H2B2 425 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 FN3KQ9H479 309 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 HINT3Q9NQE9 182 aaKnown RBP12.59□□□□□ -0.39
CLDN11-209ENST00000489485 SLC7A10Q9NS82 523 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
CLDN11-209ENST00000489485 USP9XQ93008 2570 aaPredicted RBP12.58□□□□□ -0.4
CLDN11-209ENST00000489485 PRSS37A4D1T9 235 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 PRR23D1E9PI22 279 aaPredicted RBP12.58□□□□□ -0.4
CLDN11-209ENST00000489485 MPZL2O60487 215 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 WBP4O75554 376 aaKnown RBP12.58□□□□□ -0.4
CLDN11-209ENST00000489485 CGAP01215 116 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 GYPBP06028 91 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 LYNP07948 512 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 PGA4P0DJD7 388 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 PGA3P0DJD8 388 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 PRR23D2P0DMB1 279 aaPredicted RBP12.58□□□□□ -0.4
CLDN11-209ENST00000489485 CLUP10909 449 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 CSNK1A1P48729 337 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 SH3BGRP55822 239 aaPredicted RBP12.58□□□□□ -0.4
CLDN11-209ENST00000489485 SNRPGP62308 76 aaKnown RBP12.58□□□□□ -0.4
CLDN11-209ENST00000489485 FAPQ12884 760 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 CDK5R2Q13319 367 aa12.58□□□□□ -0.4
CLDN11-209ENST00000489485 SMN1Q16637 294 aaKnown RBP12.58□□□□□ -0.4
CLDN11-209ENST00000489485 FBXW9Q5XUX1 488 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms