RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 DENND2DQ9H6A0 471 aaPredicted RBP7.66□□□□□ -1.18
SSBP1-212ENST00000489378 IL20RAQ9UHF4 553 aa7.66□□□□□ -1.18
SSBP1-212ENST00000489378 POFUT2Q9Y2G5 429 aa7.66□□□□□ -1.18
SSBP1-212ENST00000489378 HIF3AQ9Y2N7 669 aa7.66□□□□□ -1.18
SSBP1-212ENST00000489378 IGHV2-70DA0A0C4DH43 119 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 PRAMEF27A3QJZ7 478 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 CFAP73A6NFT4 308 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 NPIPB7O75200 414 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 UBL3O95164 117 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 IGHV3-13P01766 116 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 GUSBP08236 651 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 GSTA1P08263 222 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 DRD4P21917 467 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 FUT4P22083 530 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 CAMK2DQ13557 499 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 C1DQ13901 141 aaKnown RBP7.65□□□□□ -1.18
SSBP1-212ENST00000489378 GALNTL6Q49A17 601 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 FOXB2Q5VYV0 432 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 TNFAIP8L2Q6P589 184 aaPredicted RBP7.65□□□□□ -1.18
SSBP1-212ENST00000489378 C6orf89Q6UWU4 347 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 SKA3Q8IX90 412 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 KRTCAP2Q8N6L1 136 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 XAGE5Q8WWM1 108 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 PTDSS2Q9BVG9 487 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 EGLN1Q9GZT9 426 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 TUBB1Q9H4B7 451 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 POLE3Q9NRF9 147 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 EXD2Q9NVH0 621 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 GIMAP2Q9UG22 337 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 FBXL3Q9UKT7 428 aa7.65□□□□□ -1.18
SSBP1-212ENST00000489378 ZNF816-ZNF321PA0A0X1KG74 233 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 RNF103-CHMP3A0A140T963 221 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 A6NHS1 94 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 LSM1O15116 133 aaKnown RBP7.64□□□□□ -1.19
SSBP1-212ENST00000489378 BPNT1O95861 308 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 LINC00032P0C843 101 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 GKN3PP0CG01 181 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 MPV17P39210 176 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 SERPINB9P50453 376 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 UCP2P55851 309 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 FGF12P61328 243 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 BTG1P62324 171 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 C2orf54Q08AI8 447 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 PMS2P3Q13401 168 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 PTGR1Q14914 329 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 MOGQ16653 247 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 GSTA3Q16772 222 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 ATAD3BQ5T9A4 648 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 GPR157Q5UAW9 335 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 ZNF774Q6NX45 483 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 FRMD7Q6ZUT3 714 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 CLECL1Q8IZS7 167 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 CADM2Q8N3J6 435 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 C11orf44Q8N8P7 122 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 MFSD8Q8NHS3 518 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 TBC1D15Q8TC07 691 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 MIPOL1Q8TD10 442 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 RAB40AQ8WXH6 277 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 COQ8BQ96D53 544 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 PAFAH2Q99487 392 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 FOXB1Q99853 325 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 EMC6Q9BV81 110 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 SSBP3Q9BWW4 388 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-212ENST00000489378 CDH20Q9HBT6 801 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 TMEM106BQ9NUM4 274 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 NINJ2Q9NZG7 142 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-212ENST00000489378 LRCH1Q9Y2L9 728 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 STAB2Q8WWQ8 2551 aa7.64□□□□□ -1.19
SSBP1-212ENST00000489378 KIR2DS1A0A191URI9 304 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 CEACAM18A8MTB9 384 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 TNFRSF13BO14836 293 aaPredicted RBP7.63□□□□□ -1.19
SSBP1-212ENST00000489378 AHSA1O95433 338 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 HPRP00739 348 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 WNT2P09544 360 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 HLA-DOBP13765 273 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 UQCRBP14927 111 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 RPS5P46782 204 aaKnown RBP7.63□□□□□ -1.19
SSBP1-212ENST00000489378 PCBP3P57721 371 aaKnown RBP7.63□□□□□ -1.19
SSBP1-212ENST00000489378 CAV1Q03135 178 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 HERPUD1Q15011 391 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 LARS2Q15031 903 aaKnown RBP7.63□□□□□ -1.19
SSBP1-212ENST00000489378 GPAT3Q53EU6 434 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 SPATA46Q5T0L3 261 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 MRPL2Q5T653 305 aaKnown RBP7.63□□□□□ -1.19
SSBP1-212ENST00000489378 ATG16L1Q676U5 607 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 Q6ZTK2 550 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 CPEB3Q8NE35 698 aaKnown RBP7.63□□□□□ -1.19
SSBP1-212ENST00000489378 OR1J1Q8NGS3 322 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 IPCEF1Q8WWN9 437 aaPredicted RBP7.63□□□□□ -1.19
SSBP1-212ENST00000489378 NANOGQ9H9S0 305 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 TCF7L2Q9NQB0 619 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 ATAD3AQ9NVI7 634 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 RLIMQ9NVW2 624 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 TMED5Q9Y3A6 229 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 FIS1Q9Y3D6 152 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 GPR45Q9Y5Y3 372 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
SSBP1-212ENST00000489378 PLSCR5A0PG75 271 aa7.62□□□□□ -1.19
SSBP1-212ENST00000489378 POC1B-GALNT4F8VUJ3 575 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms