RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PYHIN1Q6K0P9 492 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 FNDC5Q8NAU1 212 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 ST20-AS1Q8NBB2 130 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 OR52H1Q8NGJ2 320 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 OR1F12Q8NHA8 337 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 SDR42E1Q8WUS8 393 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 C7orf34Q96L11 122 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 SHANK2-AS3Q9BTD1 123 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 ISYNA1Q9NPH2 558 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 KLHL28Q9NXS3 571 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 TAS2R3Q9NYW6 316 aa1.25□□□□□ -2.21
SMC4-219ENST00000487747 AHDC1Q5TGY3 1603 aaPredicted RBP1.25□□□□□ -2.21
SMC4-219ENST00000487747 KMT2BQ9UMN6 2715 aaPredicted RBP1.24□□□□□ -2.21
SMC4-219ENST00000487747 MSH6P52701 1360 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 IGHV3OR16-8A0A075B7F1 116 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 UBXN8O00124 270 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 HSD17B6O14756 317 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 MAPK13O15264 365 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 IGHDP01880 384 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 IMPDH1P20839 514 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 CA8P35219 290 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 MDH1P40925 334 aaKnown RBP1.24□□□□□ -2.21
SMC4-219ENST00000487747 CDKN2BP42772 138 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 CXCL12P48061 93 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 HTD2P86397 168 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 CDC37Q16543 378 aaPredicted RBP1.24□□□□□ -2.21
SMC4-219ENST00000487747 TMEM205Q6UW68 189 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 ARL10Q8N8L6 244 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 SYT14Q8NB59 555 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 OR10T2Q8NGX3 314 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 OR8U1Q8NH10 309 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 C15orf40Q8WUR7 153 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 OMDQ99983 421 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 RAB34Q9BZG1 259 aa1.24□□□□□ -2.21
SMC4-219ENST00000487747 PRRC2BQ5JSZ5 2229 aaKnown RBP1.23□□□□□ -2.21
SMC4-219ENST00000487747 A0A1B0GWJ7 208 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 F5H6K3 240 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 DIRAS3O95661 229 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 AP2A1O95782 977 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 GPR6P46095 362 aaPredicted RBP1.23□□□□□ -2.21
SMC4-219ENST00000487747 RPS11P62280 158 aaKnown RBP eCLIP1.23□□□□□ -2.218e-17■■■■■ 578.9
SMC4-219ENST00000487747 KLRC3Q07444 240 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 SNRNP35Q16560 246 aaKnown RBP1.23□□□□□ -2.21
SMC4-219ENST00000487747 TATDN3Q17R31 274 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 C1orf220Q5T0J3 134 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 SPINT4Q6UDR6 99 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 ABHD3Q8WU67 409 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 C17orf50Q8WW18 174 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 ZNF681Q96N22 645 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 TUBGCP2Q9BSJ2 902 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 ELOVL3Q9HB03 270 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 POLE3Q9NRF9 147 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 PCSK1NQ9UHG2 260 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 KIAA1257Q9ULG3 409 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 ODF2LQ9ULJ1 636 aa1.23□□□□□ -2.21
SMC4-219ENST00000487747 A0A0U1RQV1 116 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 UPK3AO75631 287 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 KRT8P05787 483 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 GNAO1P09471 354 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 DRD5P21918 477 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 IL12AP29459 219 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 CD86P42081 329 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 QARSP47897 775 aaKnown RBP1.22□□□□□ -2.21
SMC4-219ENST00000487747 PPT1P50897 306 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 SUB1P53999 127 aaKnown RBP eCLIP1.22□□□□□ -2.21
SMC4-219ENST00000487747 ERVK-25P63136 954 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 IRX3P78415 501 aaPredicted RBP1.22□□□□□ -2.21
SMC4-219ENST00000487747 ARG2P78540 354 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 SELPLGQ14242 412 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 MESDQ14696 234 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 RBMY1FQ15415 496 aaKnown RBP1.22□□□□□ -2.21
SMC4-219ENST00000487747 RIPPLY2Q5TAB7 128 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 VSTM4Q8IW00 320 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 OR4K5Q8NGD3 323 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 OR5D13Q8NGL4 314 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 OR4D5Q8NGN0 318 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 COQ8AQ8NI60 647 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 PHOSPHO2Q8TCD6 241 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 CREB3L1Q96BA8 519 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 EFHD2Q96C19 240 aaPredicted RBP1.22□□□□□ -2.21
SMC4-219ENST00000487747 MRPL37Q9BZE1 423 aaKnown RBP1.22□□□□□ -2.21
SMC4-219ENST00000487747 COQ10BQ9H8M1 238 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 LAMP5Q9UJQ1 280 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 MEMO1Q9Y316 297 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 OR10H1Q9Y4A9 318 aa1.22□□□□□ -2.21
SMC4-219ENST00000487747 TRIP11Q15643 1979 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 ATP8B3O60423 1300 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 MBLAC1A4D2B0 266 aaPredicted RBP1.21□□□□□ -2.22
SMC4-219ENST00000487747 RGSL1A5PLK6 1076 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 ATP5LO75964 103 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 HLA-DQA1P01909 254 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 CD74P04233 296 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 HLA-DPB1P04440 258 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 CCDC130P13994 396 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 NCF1P14598 390 aaPredicted RBP1.21□□□□□ -2.22
SMC4-219ENST00000487747 PAX7P23759 505 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 HMGB2P26583 209 aaKnown RBP1.21□□□□□ -2.22
SMC4-219ENST00000487747 RFX3P48380 749 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 RBX1P62877 108 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 SCRN3Q0VDG4 424 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms