RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 DPP4P27487 766 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 ACVR1BP36896 505 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 TNFSF10P50591 281 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 SLC37A1P57057 533 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 RAE1P78406 368 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 OCA2Q04671 838 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 KLC1Q07866 573 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 HSPB2Q16082 182 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 PSG3Q16557 428 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 TMEM35AQ53FP2 167 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 C6orf226Q5I0X4 101 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 FHL5Q5TD97 284 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 RPTNQ6XPR3 784 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 SLCO4C1Q6ZQN7 724 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 PTCD3Q96EY7 689 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 MDFIQ99750 246 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 IL1RL2Q9HB29 575 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 UFSP2Q9NUQ7 469 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 PIPOXQ9P0Z9 390 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 TXNDC16Q9P2K2 825 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 U3KQE9 123 aa4.72□□□□□ -1.65
CCDC39-205ENST00000485055 TPRP12270 2363 aaKnown RBP4.72□□□□□ -1.65
CCDC39-205ENST00000485055 SMCO3A2RU48 225 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 NDUFA2O43678 99 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 SYNGR4O95473 234 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 CST4P01036 141 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 DANCRP0C864 163 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 LOXL3P58215 753 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 RPS18P62269 152 aaKnown RBP4.71□□□□□ -1.65
CCDC39-205ENST00000485055 TBPL1P62380 186 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 DUSP2Q05923 314 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 RBBP7Q16576 425 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 NDUFA5Q16718 116 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 TIFABQ6ZNK6 161 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 PGAP1Q75T13 922 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 MRPL21Q7Z2W9 205 aaKnown RBP4.71□□□□□ -1.65
CCDC39-205ENST00000485055 CPEB2Q7Z5Q1 589 aaKnown RBP4.71□□□□□ -1.65
CCDC39-205ENST00000485055 ANKRD46Q86W74 232 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 C17orf64Q86WR6 236 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 WFDC8Q8IUA0 241 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 MFSD4AQ8N468 514 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 MMGT1Q8N4V1 131 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 MORN4Q8NDC4 146 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 OR10Q1Q8NGQ4 319 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 EEF1AKMT1Q8WVE0 214 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 UBE2FQ969M7 185 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 RERGQ96A58 199 aaPredicted RBP4.71□□□□□ -1.65
CCDC39-205ENST00000485055 CXorf58Q96LI9 332 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 RNF145Q96MT1 663 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 OR4K3Q96R72 315 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 RBBP8Q99708 897 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 NPAS1Q99742 590 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 MCCC2Q9HCC0 563 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 SH2D2AQ9NP31 389 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 AGPAT4Q9NRZ5 378 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 SCN2AQ99250 2005 aa4.71□□□□□ -1.65
CCDC39-205ENST00000485055 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 A0A1W2PPQ1 181 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 A0A1W2PS29 197 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 OR6C68A6NDL8 312 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 A8MUA0 341 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 CCSO14618 274 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 FFAR3O14843 346 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 GPR42O15529 346 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 P2RX6O15547 441 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 RBMXL2O75526 392 aaKnown RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 GASTP01350 101 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 ANXA5P08758 320 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 GSTT2P0CG29 244 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 GSTT2BP0CG30 244 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 C1GALT1C1LP0DN25 315 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 DBTP11182 482 aaKnown RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 ACADSP16219 412 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 HLA-GP17693 338 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 PMCHP20382 165 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 NPR2P20594 1047 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 GCSHP23434 173 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 EPHA3P29320 983 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 RIDAP52758 137 aaKnown RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 EFNA3P52797 238 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 PSME3P61289 254 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 SLC9A3R2Q15599 337 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 C2orf68Q2NKX9 166 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 TMEM207Q6UWW9 146 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 ABHD13Q7L211 337 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 PRUNE1Q86TP1 453 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 GPSM1Q86YR5 675 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 HS3ST5Q8IZT8 346 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 TMEM156Q8N614 296 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 C16orf52Q8NHV5 167 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 VANGL1Q8TAA9 524 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-205ENST00000485055 RNF138Q8WVD3 245 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 UBE2E3Q969T4 207 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 CREB3L1Q96BA8 519 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 AMBRA1Q9C0C7 1298 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 SLC22A4Q9H015 551 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 CDCP1Q9H5V8 836 aa4.71□□□□□ -1.66
CCDC39-205ENST00000485055 PPP1R3EQ9H7J1 279 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms