RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 UGT2A1Q9Y4X1 527 aa2.69□□□□□ -1.98
CLCC1-209ENST00000482889 MMP24Q9Y5R2 645 aa2.69□□□□□ -1.98
CLCC1-209ENST00000482889 PRSS21Q9Y6M0 314 aa2.69□□□□□ -1.98
CLCC1-209ENST00000482889 CNTNAP1P78357 1384 aa2.69□□□□□ -1.98
CLCC1-209ENST00000482889 MROH7-TTC4A0A0A0MT08 1334 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 LOC110117498-PIK3R3F6TDL0 507 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CCL21O00585 134 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CALUO43852 315 aaPredicted RBP2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CHST1O43916 411 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 SCN2BO60939 215 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CDK14O94921 469 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 TIMP1P01033 207 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 OXTP01178 125 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 IGHV3-23P01764 117 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 FOLR1P15328 257 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 EIF2S2P20042 333 aaKnown RBP2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CD82P27701 267 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 IL12BP29460 328 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 OR3A4PP47883 348 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 RFX3P48380 749 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 TMED10P49755 219 aaKnown RBP2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CCNHP51946 323 aaPredicted RBP2.68□□□□□ -1.98
CLCC1-209ENST00000482889 BLVRAP53004 296 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CRISP1P54107 249 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 FBXW4P57775 412 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 LCN2P80188 198 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 CHRNB3Q05901 458 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 STX3Q13277 289 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 GNMTQ14749 295 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 NCF4Q15080 339 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 LPAL2Q16609 132 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 Q1RN00 199 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 PAGE2BQ5JRK9 111 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 PPM1LQ5SGD2 360 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 REEP3Q6NUK4 255 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 FAAP20Q6NZ36 180 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 TRIM40Q6P9F5 258 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 PAMR1Q6UXH9 720 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 RFLNAQ6ZTI6 216 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 STXBP4Q6ZWJ1 553 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 SLC16A14Q7RTX9 510 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 MRPL21Q7Z2W9 205 aaKnown RBP2.68□□□□□ -1.98
CLCC1-209ENST00000482889 PPP1R27Q86WC6 154 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 APOBEC3FQ8IUX4 373 aaKnown RBP2.68□□□□□ -1.98
CLCC1-209ENST00000482889 MFSD6LQ8IWD5 586 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 ZNF100Q8IYN0 542 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 PUSL1Q8N0Z8 303 aaKnown RBP2.68□□□□□ -1.98
CLCC1-209ENST00000482889 PYROXD1Q8WU10 500 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 TSSK3Q96PN8 268 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 PLEKHF1Q96S99 279 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 TSG101Q99816 390 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 RARRES2Q99969 163 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 NAT9Q9BTE0 207 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 RAB1BQ9H0U4 201 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 GOLPH3Q9H4A6 298 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 IL26Q9NPH9 171 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 ZNF302Q9NR11 478 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 MS4A12Q9NXJ0 267 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 GIN1Q9NXP7 522 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 ADA2Q9NZK5 511 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 IFNKQ9P0W0 207 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 NUP50Q9UKX7 468 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 MOKQ9UQ07 419 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 V9GY05 133 aa2.68□□□□□ -1.98
CLCC1-209ENST00000482889 IGKV3D-15A0A087WSY6 115 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 IGKV1D-13A0A0B4J2D9 117 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 A0A1B0GW15 77 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 ERVV-1B6SEH8 477 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 AIM2O14862 343 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 ZBTB5O15062 677 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 HCRTR1O43613 425 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 ENTPD5O75356 428 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 FCN3O75636 299 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 SMC2O95347 1197 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 CLIC3O95833 236 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 THY1P04216 161 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 RD3LP0DJH9 198 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 IGKV1-13P0DP09 117 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 MYL2P10916 166 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 NR2C1P13056 603 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 PMCHP20382 165 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 GABRR2P28476 465 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 IL12AP29459 219 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 PRDX3P30048 256 aaKnown RBP2.67□□□□□ -1.98
CLCC1-209ENST00000482889 RRM2P31350 389 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 UGT1A3P35503 534 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 NAA10P41227 235 aaPredicted RBP2.67□□□□□ -1.98
CLCC1-209ENST00000482889 HAAOP46952 286 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 ERVK-25P63136 954 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 MRPS22P82650 360 aaKnown RBP2.67□□□□□ -1.98
CLCC1-209ENST00000482889 REG3AQ06141 175 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 PMS2P3Q13401 168 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 ARL6IP1Q15041 203 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 TSC22D1Q15714 1073 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 GABRA6Q16445 453 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 GSG1Q2KHT4 349 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 PARP15Q460N3 678 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 MARCH8Q5T0T0 291 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 C9orf135Q5VTT2 229 aa2.67□□□□□ -1.98
CLCC1-209ENST00000482889 RNLSQ5VYX0 342 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms