RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	SLC22A24	Q8N4F4	322 aa		12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	NOXO1	Q8NFA2	376 aa		12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	MCHR2	Q969V1	340 aa		12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	ZNF347	Q96SE7	839 aa		12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	SH3GL3	Q99963	347 aa		12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	VRK1	Q99986	396 aa	Predicted RBP	12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	MYLK2	Q9H1R3	596 aa		12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	FKBP7	Q9Y680	259 aa		12.97	□□□□□ -0.33
CCNL1-222	ENST00000479596	ATR	Q13535	2644 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596		J3KTA2	159 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	CXCR6	O00574	342 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	CCDC22	O60826	627 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	UBL3	O95164	117 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	RAB36	O95755	333 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	TP53	P04637	393 aa	Predicted RBP	12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	YAP1	P46937	504 aa	Known RBP	12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	GSK3B	P49841	420 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	ZNF133	P52736	654 aa	Predicted RBP	12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	MYBPC1	Q00872	1141 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	FHL1	Q13642	323 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	RAB39A	Q14964	217 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	FXN	Q16595	210 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	C6orf52	Q5T4I8	152 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	HACD2	Q6Y1H2	254 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	SPATA21	Q7Z572	469 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	NMD3	Q96D46	503 aa	Known RBP	12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	YAE1D1	Q9NRH1	226 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	INIP	Q9NRY2	104 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	AP3M1	Q9Y2T2	418 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596	MED31	Q9Y3C7	131 aa		12.96	□□□□□ -0.33
CCNL1-222	ENST00000479596		A0A1W2PRG6	482 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	NPIPB13	A6NJU9	1138 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	CENPBD1	B2RD01	187 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	NPIPB4	C9JG80	1138 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	TRMU	O75648	421 aa	Known RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	PRSS23	O95084	383 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	OR8G3P	P0DMU2	310 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	ACADS	P16219	412 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	MAK	P20794	623 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	USF1	P22415	310 aa	Predicted RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	NR4A2	P43354	598 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	PDLIM4	P50479	330 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	SEC24C	P53992	1094 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	CLRN1	P58418	232 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	ST3GAL3	Q11203	375 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	LAPTM4A	Q15012	233 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	C10orf128	Q5T292	105 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	CBLL1	Q75N03	491 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	TSEN54	Q7Z6J9	526 aa	Known RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	MEX3D	Q86XN8	651 aa	Known RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	OFCC1	Q8IZS5	231 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	SYT14	Q8NB59	555 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	OR4K5	Q8NGD3	323 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	HDAC2	Q92769	488 aa	Known RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	MRPL24	Q96A35	216 aa	Known RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	HOPX	Q9BPY8	73 aa	Predicted RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	MRPL37	Q9BZE1	423 aa	Known RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	RHCG	Q9UBD6	479 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	ABCD2	Q9UBJ2	740 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	HIF3A	Q9Y2N7	669 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	UGT2A1	Q9Y4X1	527 aa		12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	CHD3	Q12873	2000 aa	Known RBP	12.95	□□□□□ -0.34
CCNL1-222	ENST00000479596	MXRA5	Q9NR99	2828 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	YLPM1	P49750	1951 aa	Known RBP	12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	IGKV1D-43	A0A0B4J1Z2	117 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	MCIDAS	D6RGH6	385 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	NDUFS8	O00217	210 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	ATP8B1	O43520	1251 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	SLC2A10	O95528	541 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	ZNF682	O95780	498 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	IFNW1	P05000	195 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	SERPINA5	P05154	406 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	IGHV4-31	P0DP07	118 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	GLRX	P35754	106 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	NUDT2	P50583	147 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	DAP3	P51398	398 aa	Known RBP	12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	NRN1L	Q496H8	165 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	NRM	Q8IXM6	262 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	LRRC75A	Q8NAA5	344 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	RBM15B	Q8NDT2	890 aa	Known RBP	12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	GEMIN6	Q8WXD5	167 aa	Known RBP	12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	LZIC	Q8WZA0	190 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	BPIFA2	Q96DR5	249 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	HSH2D	Q96JZ2	352 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	FOXN4	Q96NZ1	517 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	ELAC2	Q9BQ52	826 aa	Known RBP	12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	PIMREG	Q9BSJ6	248 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	EFCAB1	Q9HAE3	211 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	FBXL3	Q9UKT7	428 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	CMAHP	Q9Y471	501 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	RTTN	Q86VV8	2226 aa		12.94	□□□□□ -0.34
CCNL1-222	ENST00000479596	IGHV4-61	A0A0C4DH41	118 aa		12.93	□□□□□ -0.34
CCNL1-222	ENST00000479596	LOC390937	A0A1W2PQ73	354 aa		12.93	□□□□□ -0.34
CCNL1-222	ENST00000479596		A8MV72	311 aa	Predicted RBP	12.93	□□□□□ -0.34
CCNL1-222	ENST00000479596	SERPINA1	P01009	418 aa		12.93	□□□□□ -0.34
CCNL1-222	ENST00000479596	IGHM	P01871	453 aa		12.93	□□□□□ -0.34
CCNL1-222	ENST00000479596	MMP7	P09237	267 aa	Predicted RBP	12.93	□□□□□ -0.34
CCNL1-222	ENST00000479596	IFI30	P13284	250 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms