RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CLRN1P58418 232 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 GSG1Q2KHT4 349 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 VHLLQ6RSH7 139 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 MBOAT2Q6ZWT7 520 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 PIWIL3Q7Z3Z3 882 aaKnown RBP18.34■□□□□ 0.53
LIME1-204ENST00000476183 SLC22A24Q8N4F4 322 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 ANKS4BQ8N8V4 417 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 LRRC75AQ8NAA5 344 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 SYT14Q8NB59 555 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 NOXO1Q8NFA2 376 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 OR4F15Q8NGB8 312 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 FBXO17Q96EF6 278 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 C7orf34Q96L11 122 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 NMNAT1Q9HAN9 279 aaPredicted RBP18.34■□□□□ 0.53
LIME1-204ENST00000476183 TMEM38BQ9NVV0 291 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 NDUFAF4Q9P032 175 aa18.34■□□□□ 0.53
LIME1-204ENST00000476183 TRAV27A0A087WT01 109 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 H7C417 338 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 SAGP10523 405 aaPredicted RBP18.33■□□□□ 0.52
LIME1-204ENST00000476183 ACADSP16219 412 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 GIPRP48546 466 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 PTDSS1P48651 473 aaKnown RBP18.33■□□□□ 0.52
LIME1-204ENST00000476183 ADIPOQQ15848 244 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 ALG10Q5BKT4 473 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 ZNF730Q6ZMV8 503 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 IGFN1Q86VF2 1251 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 RNF113BQ8IZP6 322 aaKnown RBP18.33■□□□□ 0.52
LIME1-204ENST00000476183 NUP37Q8NFH4 326 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 OR51A7Q8NH64 312 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 HDAC2Q92769 488 aaKnown RBP18.33■□□□□ 0.52
LIME1-204ENST00000476183 TNFRSF13CQ96RJ3 184 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 CDRT15Q96T59 188 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 TXNIPQ9H3M7 391 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 GORASP2Q9H8Y8 452 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 BARX1Q9HBU1 254 aaPredicted RBP18.33■□□□□ 0.52
LIME1-204ENST00000476183 RTTNQ86VV8 2226 aa18.33■□□□□ 0.52
LIME1-204ENST00000476183 NPIPB13A6NJU9 1138 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 CENPBD1B2RD01 187 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 NPIPB4C9JG80 1138 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 RNF223E7ERA6 249 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 CDC42EP2O14613 210 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 SSX4O60224 188 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 OR4A8P0C604 315 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 SERPINF1P36955 418 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 ZNF133P52736 654 aaPredicted RBP18.32■□□□□ 0.52
LIME1-204ENST00000476183 RAB1AP62820 205 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 VLDLRP98155 873 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 CHRNB3Q05901 458 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 TOP3AQ13472 1001 aaPredicted RBP18.32■□□□□ 0.52
LIME1-204ENST00000476183 IQCCQ4KMZ1 466 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 CYP4Z1Q86W10 505 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 FITM2Q8N6M3 262 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 MAPK1IP1LQ8NDC0 245 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 OR13C2Q8NGS9 318 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 SLC7A13Q8TCU3 470 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 NANOS1Q8WY41 292 aaKnown RBP18.32■□□□□ 0.52
LIME1-204ENST00000476183 NMD3Q96D46 503 aaKnown RBP18.32■□□□□ 0.52
LIME1-204ENST00000476183 SH3GL3Q99963 347 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 SAMD4AQ9UPU9 718 aaKnown RBP18.32■□□□□ 0.52
LIME1-204ENST00000476183 V9GYQ6 96 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 CR1P17927 2039 aa18.32■□□□□ 0.52
LIME1-204ENST00000476183 ANK3Q12955 4377 aaKnown RBP18.31■□□□□ 0.52
LIME1-204ENST00000476183 IGKV1D-43A0A0B4J1Z2 117 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 EFCAB9A8MZ26 197 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 hCG_2039718K7EN88 272 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 DIRAS1O95057 198 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 UBL3O95164 117 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 HEXAP06865 529 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 OR8G3PP0DMU2 310 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 THBS4P35443 961 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 GPR4P46093 362 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 CTXN1P60606 82 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 RAB35Q15286 201 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 SAMD4BQ5PRF9 694 aaKnown RBP18.31■□□□□ 0.52
LIME1-204ENST00000476183 PODNL1Q6PEZ8 512 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 HDDC2Q7Z4H3 204 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 OAFQ86UD1 273 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 ZNF584Q8IVC4 421 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 DEFB107AQ8IZN7 70 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 IL17RDQ8NFM7 739 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 OR4K5Q8NGD3 323 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 KCNK17Q96T54 332 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 ANKRD19PQ9H560 264 aa18.31■□□□□ 0.52
LIME1-204ENST00000476183 ZNF346Q9UL40 294 aaKnown RBP18.31■□□□□ 0.52
LIME1-204ENST00000476183 A0A1W2PRQ8 180 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 GMNNO75496 209 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 PDE5AO76074 875 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 SLC2A10O95528 541 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 RAB36O95755 333 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 IGHMP01871 453 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 SEMG1P04279 462 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 H1F0P07305 194 aaKnown RBP18.3■□□□□ 0.52
LIME1-204ENST00000476183 ZNF35P13682 527 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 ZNF26P17031 533 aaPredicted RBP18.3■□□□□ 0.52
LIME1-204ENST00000476183 RHCEP18577 417 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 NUDT6P53370 316 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 FMODQ06828 376 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 DGCR6Q14129 220 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 RAB39AQ14964 217 aa18.3■□□□□ 0.52
LIME1-204ENST00000476183 KRT72Q14CN4 511 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms