RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SURF6O75683 361 aaKnown RBP2.18□□□□□ -2.06
LTN1-204ENST00000475344 IL1BP01584 269 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 TCN1P20061 433 aaPredicted RBP2.18□□□□□ -2.06
LTN1-204ENST00000475344 HMGCS1Q01581 520 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 MRPL28Q13084 256 aaKnown RBP2.18□□□□□ -2.06
LTN1-204ENST00000475344 PLD1Q13393 1074 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 ARHGAP19Q14CB8 494 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 ZNF77Q15935 545 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 C6orf226Q5I0X4 101 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 COA6Q5JTJ3 125 aaKnown RBP2.18□□□□□ -2.06
LTN1-204ENST00000475344 TMEM135Q86UB9 458 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 ECHDC2Q86YB7 292 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 PIANPQ8IYJ0 282 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 ACOT4Q8N9L9 421 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 OR2G3Q8NGZ4 309 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 OR5W2Q8NH69 310 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 ZNF461Q8TAF7 563 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 STMN2Q93045 179 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 OR10C1Q96KK4 312 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 CNN2Q99439 309 aaKnown RBP2.18□□□□□ -2.06
LTN1-204ENST00000475344 ANKRD19PQ9H560 264 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 NMRAL1Q9HBL8 299 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 TM9SF3Q9HD45 589 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 SLC40A1Q9NP59 571 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 SLCO1B3Q9NPD5 702 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 HOXC10Q9NYD6 342 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 CALYQ9NYX4 217 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 XCL2Q9UBD3 114 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 PEX16Q9Y5Y5 336 aa2.18□□□□□ -2.06
LTN1-204ENST00000475344 A0A1W2PPE3 182 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 PRSS37A4D1T9 235 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 TOM1O60784 492 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 OR7A10O76100 309 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 C2P06681 752 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 ADRA2AP08913 450 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 SMIM10L1P0DMW3 83 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 MX1P20591 662 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 UGT2B15P54855 530 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 GUCA2BQ16661 112 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 FBXW9Q5XUX1 488 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 C1orf94Q6P1W5 598 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 LRRC74BQ6ZQY2 392 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 SMIM10Q96HG1 83 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 SH3GL1Q99961 368 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 FAIM2Q9BWQ8 316 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 OSBPL11Q9BXB4 747 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 PPA2Q9H2U2 334 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 NOX3Q9HBY0 568 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 ZNF639Q9UID6 485 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 CARMIL3Q8ND23 1372 aa2.17□□□□□ -2.06
LTN1-204ENST00000475344 DHX57Q6P158 1386 aaKnown RBP2.16□□□□□ -2.06
LTN1-204ENST00000475344 PLAC8L1A1L4L8 177 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 H3BNH8 94 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 XKRYO14609 159 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 ZDHHC11BP0C7U3 371 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 GKN3PP0CG01 181 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 NCK1P16333 377 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 TCN2P20062 427 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 CRYBB2P43320 205 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 NPBWR2P48146 333 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 GSSP48637 474 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 SEC61GP60059 68 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 CTSL3PQ5NE16 218 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 DNLZQ5SXM8 178 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 OR2A2Q6IF42 318 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 THOC6Q86W42 341 aaKnown RBP2.16□□□□□ -2.06
LTN1-204ENST00000475344 UBALD2Q8IYN6 164 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 OR1L4Q8NGR5 311 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 ACTRT1Q8TDG2 376 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.16□□□□□ -2.06
LTN1-204ENST00000475344 SORT1Q99523 831 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 SH3GL3Q99963 347 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 TRIM62Q9BVG3 475 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 NT5MQ9NPB1 228 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 CTPS2Q9NRF8 586 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 SPATA7Q9P0W8 599 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 IKZF2Q9UKS7 526 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 MMP17Q9ULZ9 603 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 NFASCO94856 1347 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 CDHR2Q9BYE9 1310 aa2.16□□□□□ -2.06
LTN1-204ENST00000475344 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.15□□□□□ -2.07
LTN1-204ENST00000475344 A0A1B0GVL5 298 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ZNF705GA8MUZ8 300 aaPredicted RBP2.15□□□□□ -2.07
LTN1-204ENST00000475344 RPL36A-HNRNPH2H7BZ11 118 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 HAS3O00219 553 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 DYNC1I1O14576 645 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 SOX15O60248 233 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 VAMP5O95183 116 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 IGHV2-5P01817 119 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ALDOBP05062 364 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 CSF3P09919 207 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 IGHV3-43DP0DP04 118 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ZNF30P17039 623 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 OMGP23515 440 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 GPR6P46095 362 aaPredicted RBP2.15□□□□□ -2.07
LTN1-204ENST00000475344 FBXW4P57775 412 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 ACVR1Q04771 509 aa2.15□□□□□ -2.07
LTN1-204ENST00000475344 PDIA2Q13087 525 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms