RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 FAM90A10PA6NDY2 464 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SLC38A8A6NNN8 435 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 J3QLI3 93 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 K7ERU9 68 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 RAB27BO00194 218 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PLPP3O14495 311 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 NCR1O76036 304 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 APOC3P02656 99 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 FUT3P21217 361 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 KDELR1P24390 212 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 HTR2CP28335 458 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 BRCC3P46736 316 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SOX2P48431 317 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PRLHRP49683 370 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 RAB5CP51148 216 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MVDP53602 400 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 UBE2MP61081 183 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 NME3Q13232 169 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 UBXN2BQ14CS0 331 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 VMACQ2NL98 169 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ZNF720Q7Z2F6 126 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SLC35E3Q7Z769 313 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 STHQ8IWL8 128 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 KLHDC8AQ8IYD2 350 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 C11orf42Q8N5U0 333 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ZNF676Q8N7Q3 588 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 C8orf31Q8N9H6 132 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ZNF738Q8NE65 137 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 OR8D4Q8NGM9 314 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TERB2Q8NHR7 220 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 C1orf54Q8WWF1 131 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 DNASE2BQ8WZ79 361 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 COQ8BQ96D53 544 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MRPS24Q96EL2 167 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 HSH2DQ96JZ2 352 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 IL4I1Q96RQ9 567 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PPIL3Q9H2H8 161 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 ARL15Q9NXU5 204 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PIPOXQ9P0Z9 390 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 EPRSP07814 1512 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 TOPBP1Q92547 1522 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TROQ12816 1431 aaPredicted RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 MTCL1Q9Y4B5 1905 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 CFAP74Q9C0B2 1584 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 OTOFQ9HC10 1997 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TBC1D3IA0A087WXS9 549 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 IGHV2-70DA0A0C4DH43 119 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 A0A1W2PPV9 198 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 SLC19A2O60779 497 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ANXA9O76027 345 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 DUX4L4P0CJ87 422 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 CD79AP11912 226 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MAKP20794 623 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PSMA1P25786 263 aaKnown RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 GSK3BP49841 420 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 AGTR2P50052 363 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LBX1P52954 281 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ARHGAP1Q07960 439 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 C2orf80Q0P641 193 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 FHL3Q13643 280 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 CRMP1Q14194 572 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 COL28A1Q2UY09 1125 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TMEM196Q5HYL7 178 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 WIPI1Q5MNZ9 446 aaPredicted RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 SDHAF4Q5VUM1 108 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 IL17RELQ6ZVW7 336 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LDLRAD3Q86YD5 345 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 FAM90A1Q86YD7 464 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 BLIDQ8IZY5 108 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 OR51G2Q8NGK0 314 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 RHOXF1Q8NHV9 184 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MAFAQ8NHW3 353 aaPredicted RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 ARRDC2Q8TBH0 407 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TNFAIP8L1Q8WVP5 186 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PLPPR2Q96GM1 343 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LRRC3BQ96PB8 259 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 EPYCQ99645 322 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MEGF9Q9H1U4 602 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PIGMQ9H3S5 423 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 EGLN3Q9H6Z9 239 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LRTM1Q9HBL6 345 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ECHDC1Q9NTX5 307 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 ELOVL5Q9NYP7 299 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TAS2R14Q9NYV8 317 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 B3GALT5Q9Y2C3 310 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MEMO1Q9Y316 297 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 NME7Q9Y5B8 376 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PHLPP1O60346 1717 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.14□□□□□ -1.91
UBR3-208ENST00000474426 AP4M1O00189 453 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 RDH16O75452 317 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 FCN3O75636 299 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MPC2O95563 127 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 TMEM50AO95807 157 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 PMP2P02689 132 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 EDN1P05305 212 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 HOXB5P09067 269 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 MTHFD2P13995 350 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 HOXA5P20719 270 aa3.14□□□□□ -1.91
UBR3-208ENST00000474426 BDKRB1P46663 353 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms