RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 RAD52P43351 418 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 GPR6P46095 362 aaPredicted RBP11.62□□□□□ -0.55
CHD3-209ENST00000473376 TEKQ02763 1124 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 NPTX1Q15818 432 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 MSMPQ1L6U9 139 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 ENTPD8Q5MY95 495 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 LRFN4Q6PJG9 635 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 UNQ6126/PRO20091Q6UXV3 157 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 CCDC80Q76M96 950 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 HIST3H2AQ7L7L0 130 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 LSRQ86X29 649 aaPredicted RBP11.62□□□□□ -0.55
CHD3-209ENST00000473376 GPR32P1Q8NGA4 272 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 OR6T1Q8NGN1 323 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 ZNF519Q8TB69 540 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 LIPHQ8WWY8 451 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 HIST1H2ACQ93077 130 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 SH3GL1Q99961 368 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 WFDC6Q9BQY6 131 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 MRPL13Q9BYD1 178 aaKnown RBP11.62□□□□□ -0.55
CHD3-209ENST00000473376 SMURF2Q9HAU4 748 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
CHD3-209ENST00000473376 GMNCA6NCL1 334 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 ANGPT2O15123 496 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 SEC14L2O76054 403 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 BCL10O95999 233 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 NPPAP01160 153 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 TSPAN19P0C672 248 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 THRBP10828 461 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 NR2C1P13056 603 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 PCGF2P35227 344 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 SRP14P37108 136 aaKnown RBP11.61□□□□□ -0.55
CHD3-209ENST00000473376 RAB39AQ14964 217 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 CYP51A1Q16850 503 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 RGS7BPQ6MZT1 257 aaPredicted RBP11.61□□□□□ -0.55
CHD3-209ENST00000473376 TMEM53Q6P2H8 277 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 WDR88Q6ZMY6 472 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 IL17RELQ6ZVW7 336 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 USP43Q70EL4 1123 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 DHDDSQ86SQ9 333 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 MEX3DQ86XN8 651 aaKnown RBP11.61□□□□□ -0.55
CHD3-209ENST00000473376 SMYD1Q8NB12 490 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 SLC30A7Q8NEW0 376 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 ATP6V1G3Q96LB4 118 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 TPK1Q9H3S4 243 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 GRIP1Q9Y3R0 1128 aa11.61□□□□□ -0.55
CHD3-209ENST00000473376 NBEAL1Q6ZS30 2694 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 TRAV20A0A0B4J274 112 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 C17orf100A8MU93 164 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 M0R3H8 397 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 RNF13O43567 381 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 RP2O75695 350 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 CH25HO95992 272 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 HPXP02790 462 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 MT-ND5P03915 603 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 MSMBP08118 114 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 SAGP10523 405 aaPredicted RBP11.6□□□□□ -0.55
CHD3-209ENST00000473376 CD247P20963 164 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 COL8A2P25067 703 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 ZNF84P51523 738 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 PLP2Q04941 152 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 TAF11Q15544 211 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 TRIP10Q15642 601 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 COQ5Q5HYK3 327 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 C10orf128Q5T292 105 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 OR51F2Q8NH61 342 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 CLDND2Q8NHS1 167 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 C11orf40Q8WZ69 217 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 SYT3Q9BQG1 590 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 HINT3Q9NQE9 182 aaKnown RBP11.6□□□□□ -0.55
CHD3-209ENST00000473376 DUSP13Q9UII6 198 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 BAG5Q9UL15 447 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 SLC7A7Q9UM01 511 aa11.6□□□□□ -0.55
CHD3-209ENST00000473376 IQCMA0A1B0GVH7 501 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 A0A1W2PRG6 482 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 LRRN3E7EW58 273 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 C11orf98E9PRG8 122 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 ICMTO60725 284 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 IFNA14P01570 189 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 MT-ND1P03886 318 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 THY1P04216 161 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 QDPRP09417 244 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 LIPAP38571 399 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 CRYBB2P43320 205 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 DAP3P51398 398 aaKnown RBP11.59□□□□□ -0.55
CHD3-209ENST00000473376 UCP2P55851 309 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 KLF3P57682 345 aaPredicted RBP11.59□□□□□ -0.55
CHD3-209ENST00000473376 LMO4P61968 165 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 MRPS34P82930 218 aaKnown RBP11.59□□□□□ -0.55
CHD3-209ENST00000473376 MYBPC1Q00872 1141 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 CYLC2Q14093 348 aaPredicted RBP11.59□□□□□ -0.55
CHD3-209ENST00000473376 TBC1D28Q2M2D7 210 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 VMACQ2NL98 169 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 SYNPRQ8TBG9 265 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 SLC26A7Q8TE54 656 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 SNX33Q8WV41 574 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 MCHR2Q969V1 340 aa11.59□□□□□ -0.55
CHD3-209ENST00000473376 MAGEB18Q96M61 343 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms