RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 SH3BGRP55822 239 aaPredicted RBP11.45□□□□□ -0.58
VPS13D-205ENST00000473099 CLDN20P56880 219 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 TMPRSS3P57727 454 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 CLRN1P58418 232 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 TAS2R43P59537 309 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 GLO1Q04760 184 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 ZNF169Q14929 603 aaPredicted RBP11.45□□□□□ -0.58
VPS13D-205ENST00000473099 INO80CQ6PI98 192 aaPredicted RBP11.45□□□□□ -0.58
VPS13D-205ENST00000473099 SHFQ7M4L6 423 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 LHFPL3Q86UP9 236 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 SLC35F2Q8IXU6 374 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 UBQLNLQ8IYU4 475 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 OR6V1Q8N148 313 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
VPS13D-205ENST00000473099 NOXO1Q8NFA2 376 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 OR10D3Q8NH80 312 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 ABTB1Q969K4 478 aaPredicted RBP11.45□□□□□ -0.58
VPS13D-205ENST00000473099 INTS12Q96CB8 462 aaKnown RBP11.45□□□□□ -0.58
VPS13D-205ENST00000473099 OR5M11Q96RB7 305 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 ARHGAP9Q9BRR9 750 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 ALG8Q9BVK2 526 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 FUNDC2Q9BWH2 189 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 NUAK2Q9H093 628 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 SLC6A15Q9H2J7 730 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 LDAHQ9H6V9 325 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 TAS2R16Q9NYV7 291 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 CLEC2DQ9UHP7 191 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 ENPP5Q9UJA9 477 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 ITPR1Q14643 2758 aa11.45□□□□□ -0.58
VPS13D-205ENST00000473099 DSPP15924 2871 aaKnown RBP11.45□□□□□ -0.58
VPS13D-205ENST00000473099 DMXL2Q8TDJ6 3036 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 IGLV1-36A0A0B4J1U3 117 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 ZNF670-ZNF695F2Z2N8 137 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 H7C1C5 153 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 CXCL13O43927 109 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 SLC16A7O60669 478 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 KHDRBS3O75525 346 aaKnown RBP11.44□□□□□ -0.58
VPS13D-205ENST00000473099 GABARAPO95166 117 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 SYNGR4O95473 234 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 IGHG3P01860 377 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 MT-ND5P03915 603 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 ADRA2AP08913 450 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 HSMCR30P0CW71 290 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 CD36P16671 472 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 PYCR1P32322 319 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
VPS13D-205ENST00000473099 RGS6P49758 472 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 CLDN18P56856 261 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 LCN6P62502 163 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 SLC17A1Q14916 467 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 ABLIM2Q6H8Q1 611 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 RPUSD3Q6P087 351 aaKnown RBP11.44□□□□□ -0.58
VPS13D-205ENST00000473099 CREB3L2Q70SY1 520 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 TRILQ7L0X0 811 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 KCTD20Q7Z5Y7 419 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 GHDCQ8N2G8 530 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 SYS1Q8N2H4 156 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 OR9K2Q8NGE7 335 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 OR51L1Q8NGJ5 315 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 RELTQ969Z4 430 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 INTS14Q96SY0 518 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 MRPL13Q9BYD1 178 aaKnown RBP11.44□□□□□ -0.58
VPS13D-205ENST00000473099 SRXN1Q9BYN0 137 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 EXO5Q9H790 373 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 MED29Q9NX70 200 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 MCTS1Q9ULC4 181 aaKnown RBP11.44□□□□□ -0.58
VPS13D-205ENST00000473099 RCE1Q9Y256 329 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 PTPRQQ9UMZ3 2332 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 NBEAQ8NFP9 2946 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 DOCK7Q96N67 2140 aa11.44□□□□□ -0.58
VPS13D-205ENST00000473099 SLC35F4A4IF30 521 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 HSPB2A8KAH6 182 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 ZNF814B7Z6K7 855 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 DCTN6O00399 190 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 GPR171O14626 319 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 SMAD9O15198 467 aaKnown RBP11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CYTIPO60759 359 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 HRGP04196 525 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 MRPL3P09001 348 aaKnown RBP11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CELA3AP09093 270 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 PGA4P0DJD7 388 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 PGA3P0DJD8 388 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CPN1P15169 458 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CPEP16870 476 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 TGFBR2P37173 567 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 STARP49675 285 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 SUCLG1P53597 346 aaKnown RBP11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CLDN15P56746 228 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CLDN17P56750 224 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 MRPL28Q13084 256 aaKnown RBP11.43□□□□□ -0.58
VPS13D-205ENST00000473099 GPR50Q13585 617 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 HSPB2Q16082 182 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CNPY1Q3B7I2 92 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 VASNQ6EMK4 673 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 ZNF322Q6U7Q0 402 aaPredicted RBP11.43□□□□□ -0.58
VPS13D-205ENST00000473099 B3GLCTQ6Y288 498 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 GDPGP1Q6ZNW5 385 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 PLEKHG7Q6ZR37 379 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 Q6ZS92 163 aa11.43□□□□□ -0.58
VPS13D-205ENST00000473099 CHMP1BQ7LBR1 199 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms