RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 GALK2Q01415 458 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 CD47Q08722 323 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 DAG1Q14118 895 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 TAF11Q15544 211 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 GLYATQ6IB77 296 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 TMEM53Q6P2H8 277 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 DPPA2Q7Z7J5 298 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 MYPOPQ86VE0 399 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-226ENST00000473066 WDFY1Q8IWB7 410 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 SLC22A24Q8N4F4 322 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 SYT14Q8NB59 555 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 MOSPD2Q8NHP6 518 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 ZNF347Q96SE7 839 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 ANKRD19PQ9H560 264 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 RNF121Q9H920 327 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 NOX3Q9HBY0 568 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 TMEM38BQ9NVV0 291 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 MAGEL2Q9UJ55 1249 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 TMEM5Q9Y2B1 443 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 HIF3AQ9Y2N7 669 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 SNX13Q9Y5W8 968 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 ENPP4Q9Y6X5 453 aa13.53□□□□□ -0.24
MRPL55-226ENST00000473066 SETD2Q9BYW2 2564 aaPredicted RBP13.52□□□□□ -0.24
MRPL55-226ENST00000473066 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
MRPL55-226ENST00000473066 NPR2P20594 1047 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 GIPRP48546 466 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 SLC9A3P48764 834 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 EFNA4P52798 201 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 RPS23P62266 143 aaKnown RBP13.52□□□□□ -0.25
MRPL55-226ENST00000473066 MYBPC1Q00872 1141 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 KRT72Q14CN4 511 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 ADIPOQQ15848 244 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 ANKDD1AQ495B1 522 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 SLC36A2Q495M3 483 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 FGD3Q5JSP0 725 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 SAMD4BQ5PRF9 694 aaKnown RBP13.52□□□□□ -0.25
MRPL55-226ENST00000473066 GKAP1Q5VSY0 366 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-226ENST00000473066 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 KRT80Q6KB66 452 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 C16orf89Q6UX73 402 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 SLC16A14Q7RTX9 510 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 OAFQ86UD1 273 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 RNF113BQ8IZP6 322 aaKnown RBP13.52□□□□□ -0.25
MRPL55-226ENST00000473066 PGAM4Q8N0Y7 254 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 RNF148Q8N7C7 305 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 FNDC8Q8TC99 324 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 HTRA1Q92743 480 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 VRK1Q99986 396 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-226ENST00000473066 KCNN2Q9H2S1 579 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 TXNIPQ9H3M7 391 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 DYNLRB1Q9NP97 96 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 KRCC1Q9NPI7 259 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-226ENST00000473066 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.25
MRPL55-226ENST00000473066 TLN2Q9Y4G6 2542 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 hCG_2039718K7EN88 272 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 H1F0P07305 194 aaKnown RBP13.51□□□□□ -0.25
MRPL55-226ENST00000473066 TCN1P20061 433 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-226ENST00000473066 THBS4P35443 961 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 CTXN1P60606 82 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 PRKCDQ05655 676 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 EFNB3Q15768 340 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 SWI5Q1ZZU3 235 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 LRFN4Q6PJG9 635 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 OR4K5Q8NGD3 323 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 OR51A7Q8NH64 312 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 FAM168AQ92567 244 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 MCHR2Q969V1 340 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 MS4A3Q96HJ5 214 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 C1orf198Q9H425 327 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 MAN2C1Q9NTJ4 1040 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 CMAHPQ9Y471 501 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 HIVEP2P31629 2446 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 CSPG4Q6UVK1 2322 aa13.51□□□□□ -0.25
MRPL55-226ENST00000473066 ABCA1O95477 2261 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 TRAV27A0A087WT01 109 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 A0A087WUU8 490 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 A6NIZ1 184 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 DYNC1I1O14576 645 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 MGRN1O60291 552 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 PTHP01270 115 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 TSPAN19P0C672 248 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 SLC25A16P16260 332 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 ZNF14P17017 642 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-226ENST00000473066 ITGA2P17301 1181 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 MAKP20794 623 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RPL4P36578 427 aaKnown RBP13.5□□□□□ -0.25
MRPL55-226ENST00000473066 GUCA1AP43080 201 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-226ENST00000473066 GPR4P46093 362 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 PPOXP50336 477 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 MNAT1P51948 309 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RAP1BP61224 184 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RPL27P61353 136 aaKnown RBP13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RAP1AP62834 184 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 HGFACQ04756 655 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 PLP2Q04941 152 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RUNX1T1Q06455 604 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RAB39AQ14964 217 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 LAPTM4AQ15012 233 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms