RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	SYT14	Q8NB59	555 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	NOXO1	Q8NFA2	376 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	PELI1	Q96FA3	418 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	FOXN4	Q96NZ1	517 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	TM9SF2	Q99805	663 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	EMC6	Q9BV81	110 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	RNF32	Q9H0A6	362 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	WDR76	Q9H967	626 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	ACOXL	Q9NUZ1	547 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	KLHL13	Q9P2N7	655 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	GRIP1	Q9Y3R0	1128 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	MUC6	Q6W4X9	2439 aa		10.99	□□□□□ -0.65
HDLBP-231	ENST00000467435	AHCTF1	Q8WYP5	2266 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	IGHV3-15	A0A0B4J1V0	119 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	LOC102725191	A0A1B0GVB3	256 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	TRDV1	A0A1B0GX56	115 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	TRABD2B	A6NFA1	517 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	METTL15	A6NJ78	407 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	FAM166B	A8MTA8	275 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	PRR32	B1ATL7	298 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435		E9PI62	339 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	EIF1AY	O14602	144 aa	Known RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	PHYH	O14832	338 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	DNPH1	O43598	174 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	GFRA3	O60609	400 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	KHDRBS3	O75525	346 aa	Known RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	RGS9	O75916	674 aa	Predicted RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	IGHG1	P01857	330 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	HLA-DPB1	P04440	258 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	HPN	P05981	417 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	SPARC	P09486	303 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	PSKH1	P11801	424 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	GBX2	P52951	348 aa	Predicted RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	CLDN20	P56880	219 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	CLRN1	P58418	232 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	H3F3A	P84243	136 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	GLO1	Q04760	184 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	ETFDH	Q16134	617 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	HBM	Q6B0K9	141 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	C22orf42	Q6IC83	251 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	CD200R1L	Q6Q8B3	271 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	NHLRC1	Q6VVB1	395 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	RPTN	Q6XPR3	784 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	ESPNL	Q6ZVH7	1005 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	GALNTL5	Q7Z4T8	443 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	ADAD1	Q96M93	576 aa	Known RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	SRXN1	Q9BYN0	137 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	SLIRP	Q9GZT3	109 aa	Known RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	ZNF552	Q9H707	407 aa	Predicted RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	MRPL22	Q9NWU5	206 aa	Known RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	ST6GALNAC2	Q9UJ37	374 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	LAMP5	Q9UJQ1	280 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	COA3	Q9Y2R0	106 aa	Predicted RBP	10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	TMEM14A	Q9Y6G1	99 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	PMF1-BGLAP	U3KQ54	211 aa		10.98	□□□□□ -0.65
HDLBP-231	ENST00000467435	EP300	Q09472	2414 aa	Predicted RBP	10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	SLC35F4	A4IF30	521 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	NPIPA2	E9PIF3	369 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	NPIPA3	F8WFD2	350 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435		H0YC42	278 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	KLRC4-KLRK1	H3BQV0	150 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	LINC01387	J3KSC0	135 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	PSMD9	O00233	223 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	GABRP	O00591	440 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	SMAD9	O15198	467 aa	Known RBP	10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	PLPP2	O43688	288 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	PGA4	P0DJD7	388 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	PGA3	P0DJD8	388 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	OR8G3P	P0DMU2	310 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	CD53	P19397	219 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	FGF9	P31371	208 aa	Predicted RBP	10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	RPS27	P42677	84 aa	Known RBP	10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	MAGEA5	P43359	124 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	CD97	P48960	835 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	STAR	P49675	285 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	ENTPD1	P49961	510 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	GFRA1	P56159	465 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	CLDN17	P56750	224 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	ADAM8	P78325	824 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	EGR3	Q06889	387 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	SLC3A1	Q07837	685 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	DYNC1I2	Q13409	638 aa	Known RBP	10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	CAMK2D	Q13557	499 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	CDK5R1	Q15078	307 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	POU4F3	Q15319	338 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	TRAM1	Q15629	374 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	ZNF404	Q494X3	552 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	OTP	Q5XKR4	325 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	DMKN	Q6E0U4	476 aa	Predicted RBP	10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	PLEKHG7	Q6ZR37	379 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	DPY19L4	Q7Z388	723 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	UBQLNL	Q8IYU4	475 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	TMEM251	Q8N6I4	163 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	FDCSP	Q8NFU4	85 aa		10.97	□□□□□ -0.65
HDLBP-231	ENST00000467435	OR6X1	Q8NH79	312 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms