RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KLHL15Q96M94 604 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 VSTM2LQ96N03 204 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 RSPO3Q9BXY4 272 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 MRPL37Q9BZE1 423 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 GPR61Q9BZJ8 451 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 SHCBP1LQ9BZQ2 653 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 RAB1BQ9H0U4 201 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 MMP27Q9H306 513 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 CDC42EP4Q9H3Q1 356 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 SCPEP1Q9HB40 452 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 FKBP14Q9NWM8 211 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TAS2R9Q9NYW1 312 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 MED11Q9P086 117 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 KLHL9Q9P2J3 617 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 MBD2Q9UBB5 411 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 CD300AQ9UGN4 299 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 MRTO4Q9UKD2 239 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 CES1P1Q9UKY3 287 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TFR2Q9UP52 801 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 KCNK7Q9Y2U2 307 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 SLC25A15Q9Y619 301 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TENM3Q9P273 2699 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 A0A0J9YW62 118 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 A0A1B0GUS0 222 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SAC3D1A6NKF1 404 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF724A8MTY0 619 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 MYO1GB0I1T2 1018 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 J3QLI3 93 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 TNFSF11O14788 317 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 HDAC3O15379 428 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SCO2O43819 266 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 OR5F1O95221 314 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ESRRBO95718 433 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 LIPFP07098 398 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 MSMBP08118 114 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 DAOP14920 347 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ANPEPP15144 967 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 PGCP20142 388 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 TYK2P29597 1187 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 IL2RGP31785 369 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 EIF1P41567 113 aaKnown RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF83P51522 516 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 IDH3GP51553 393 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 RPS6KA3P51812 740 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 GPX6P59796 221 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SSTP61278 116 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ATP6V0D1P61421 351 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 LIPEQ05469 1076 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 CYLC2Q14093 348 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 GAMTQ14353 236 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ZMYND11Q15326 602 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 MED22Q15528 200 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 CARTPTQ16568 116 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 C18orf21Q32NC0 220 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 GLE1Q53GS7 698 aaKnown RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 RNASEH2BQ5TBB1 312 aaKnown RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 LGSNQ5TDP6 509 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 FCRLAQ7L513 359 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SLC46A3Q7Z3Q1 461 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 C1QL2Q7Z5L3 287 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SVOPLQ8N434 492 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 C17orf78Q8N4C9 275 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF433Q8N7K0 673 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 PTGR2Q8N8N7 351 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ZDHHC22Q8N966 263 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 OR5M1Q8NGP8 315 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 OR51F2Q8NH61 342 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 CLHC1Q8NHS4 586 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ABHD3Q8WU67 409 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 UBTD2Q8WUN7 234 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 CERS2Q96G23 380 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 TPD52L3Q96J77 140 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 MTERF1Q99551 399 aaKnown RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SERPINI1Q99574 410 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 PKP2Q99959 881 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SH3GL3Q99963 347 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 TRIM31Q9BZY9 425 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SPACA1Q9HBV2 294 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 PALMDQ9NP74 551 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 SLC52A3Q9NQ40 469 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 NUDT15Q9NV35 164 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 HIF1ANQ9NWT6 349 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 AHSPQ9NZD4 102 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 OPTCQ9UBM4 332 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 LEF1Q9UJU2 399 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 PACSIN2Q9UNF0 486 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-207ENST00000467273 GAB2Q9UQC2 676 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 CBY1Q9Y3M2 126 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 OR10H1Q9Y4A9 318 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF780BQ9Y6R6 833 aa4.68□□□□□ -1.66
PTCD3-207ENST00000467273 LOC100506127A0A0U1RQW1 187 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 SMIM30A4D0T7 59 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 E9PI62 339 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 H0Y8G0 127 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 DNALI1O14645 258 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 SH3BGRLO75368 114 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 CRTAPO75718 401 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-207ENST00000467273 RHBDL1O75783 438 aa4.67□□□□□ -1.66
PTCD3-207ENST00000467273 AK1P00568 194 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms