RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.72■□□□□ 0.27
CAPN3-209ENST00000466222 SLC25A53Q5H9E4 307 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 SLC25A25Q6KCM7 469 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 MRGPRX4Q96LA9 322 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 SLC19A3Q9BZV2 496 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 TRIM36Q9NQ86 728 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 KLHL21Q9UJP4 597 aa16.72■□□□□ 0.27
CAPN3-209ENST00000466222 ANKRD11Q6UB99 2663 aaPredicted RBP16.72■□□□□ 0.27
CAPN3-209ENST00000466222 PRRC2CQ9Y520 2896 aaKnown RBP16.71■□□□□ 0.27
CAPN3-209ENST00000466222 BSNQ9UPA5 3926 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 A8MVM7 634 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 CENPBD1B2RD01 187 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 K7EM74 188 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 BHLHE40O14503 412 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 OR7A10O76100 309 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 CELA3AP09093 270 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 APEX1P27695 318 aaKnown RBP16.71■□□□□ 0.27
CAPN3-209ENST00000466222 DLX5P56178 289 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 IL18Q14116 193 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 RAET1LQ5VY80 246 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 VASNQ6EMK4 673 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 ASCC1Q8N9N2 400 aaKnown RBP16.71■□□□□ 0.27
CAPN3-209ENST00000466222 FAM173AQ9BQD7 235 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 ALG8Q9BVK2 526 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 RNF32Q9H0A6 362 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 ZFP64Q9NPA5 681 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 DKKL1Q9UK85 242 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 CNTRLQ7Z7A1 2325 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 DOCK10Q96BY6 2186 aa16.71■□□□□ 0.27
CAPN3-209ENST00000466222 C12orf71A8MTZ7 269 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 C1QTNF9BB2RNN3 333 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 BLOC1S5-TXNDC5H3BN57 136 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 LRRTM2O43300 516 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 TRAPPC6AO75865 159 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 CEACAM4O75871 244 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 SLC2A10O95528 541 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 C1QTNF9P0C862 333 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 RCVRNP35243 200 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 TNFSF10P50591 281 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 CAV3P56539 151 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 GALEQ14376 348 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF362Q5T0B9 420 aaPredicted RBP16.7■□□□□ 0.26
CAPN3-209ENST00000466222 C1orf140Q5VVS0 124 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 HBMQ6B0K9 141 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 PLBD1Q6P4A8 553 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 SMARCD3Q6STE5 483 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 TMEM91Q6ZNR0 172 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 TCTE3Q8IZS6 198 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 OR51G2Q8NGK0 314 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 TRAF4Q9BUZ4 470 aaPredicted RBP16.7■□□□□ 0.26
CAPN3-209ENST00000466222 SLA2Q9H6Q3 261 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 NANSQ9NR45 359 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 CMC2Q9NRP2 79 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 EXPH5Q8NEV8 1989 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 TRAV36DV7A0A075B6V5 113 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 FAM166BA8MTA8 275 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 NME2P1O60361 137 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 PDGFAP04085 211 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 NME2P22392 152 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 SFTPDP35247 375 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 INPP1P49441 399 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 SLC6A19Q695T7 634 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.7■□□□□ 0.26
CAPN3-209ENST00000466222 NOXA1Q86UR1 476 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 TPRA1Q86W33 373 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 LIX1LQ8IVB5 337 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 SLC7A5P1Q8MH63 180 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 MOSPD2Q8NHP6 518 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 KCNJ15Q99712 375 aa16.7■□□□□ 0.26
CAPN3-209ENST00000466222 DSPP15924 2871 aaKnown RBP16.69■□□□□ 0.26
CAPN3-209ENST00000466222 A0A1W2PNR3 127 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 DAPL1A0PJW8 107 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 OR2M5A3KFT3 312 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 SMIM30A4D0T7 59 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 CD8B2A6NJW9 211 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 H0YC42 278 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 LYRM1O43325 122 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 BGLAPP02818 100 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 MT-ND5P03915 603 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 ASAH2BP0C7U1 165 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 TFPIP10646 304 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 CD8BP10966 210 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 GDF1P27539 372 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 AQP2P41181 271 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 CLDN20P56880 219 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF766Q5HY98 468 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 WIPI1Q5MNZ9 446 aaPredicted RBP16.69■□□□□ 0.26
CAPN3-209ENST00000466222 IGFL2Q6UWQ7 119 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 DCLRE1CQ96SD1 692 aaKnown RBP16.69■□□□□ 0.26
CAPN3-209ENST00000466222 TTTY12Q9BZ98 90 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 RYDENQ9NUL5 291 aaKnown RBP16.69■□□□□ 0.26
CAPN3-209ENST00000466222 DKK4Q9UBT3 224 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 NUFIP1Q9UHK0 495 aaKnown RBP16.69■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF337Q9Y3M9 751 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 CHD8Q9HCK8 2581 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 PCNX3Q9H6A9 2034 aa16.69■□□□□ 0.26
CAPN3-209ENST00000466222 MCIDASD6RGH6 385 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 PRR23D1E9PI22 279 aaPredicted RBP16.68■□□□□ 0.26
CAPN3-209ENST00000466222 SLC43A1O75387 559 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 PRR23D2P0DMB1 279 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms