RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CLEC12BQ2HXU8 276 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 GSG1Q2KHT4 349 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 ALG10Q5BKT4 473 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 ZNF730Q6ZMV8 503 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 MBOAT2Q6ZWT7 520 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 CCDC36Q8IYA8 594 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 DEFB107AQ8IZN7 70 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 SLC22A24Q8N4F4 322 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 CLDN22Q8N7P3 220 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 OR13C2Q8NGS9 318 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 SH3GL3Q99963 347 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 TMEM38BQ9NVV0 291 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 CSPG4Q6UVK1 2322 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 IGKV1D-43A0A0B4J1Z2 117 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 MCIDASD6RGH6 385 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 DHHO43323 396 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 FAM107AO95990 144 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 ZNF14P17017 642 aaPredicted RBP11.24□□□□□ -0.61
XRN1-203ENST00000463916 GPR4P46093 362 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 GIPRP48546 466 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 CLRN1P58418 232 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 RAB1AP62820 205 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 KRT72Q14CN4 511 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 SWI5Q1ZZU3 235 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 PODNL1Q6PEZ8 512 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 VHLLQ6RSH7 139 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 DNM1P46Q6ZS02 220 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 PIWIL3Q7Z3Z3 882 aaKnown RBP11.24□□□□□ -0.61
XRN1-203ENST00000463916 RNF113BQ8IZP6 322 aaKnown RBP11.24□□□□□ -0.61
XRN1-203ENST00000463916 HDAC2Q92769 488 aaKnown RBP11.24□□□□□ -0.61
XRN1-203ENST00000463916 NMD3Q96D46 503 aaKnown RBP11.24□□□□□ -0.61
XRN1-203ENST00000463916 FBXO17Q96EF6 278 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 BDH2Q9BUT1 245 aa11.24□□□□□ -0.61
XRN1-203ENST00000463916 SAMD4AQ9UPU9 718 aaKnown RBP11.24□□□□□ -0.61
XRN1-203ENST00000463916 ARFGEF3Q5TH69 2177 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 SLC2A10O95528 541 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 SEMG1P04279 462 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 PTDSS1P48651 473 aaKnown RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 DAP3P51398 398 aaKnown RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 TOP3AQ13472 1001 aaPredicted RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 SEC23BQ15437 767 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 ADIPOQQ15848 244 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 SAMD4BQ5PRF9 694 aaKnown RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 BIVMQ86UB2 503 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 OAFQ86UD1 273 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 ZNF584Q8IVC4 421 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 MAPK1IP1LQ8NDC0 245 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 NOXO1Q8NFA2 376 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 KCNS3Q9BQ31 491 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 TXNIPQ9H3M7 391 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 MOV10Q9HCE1 1003 aaKnown RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 ZNF346Q9UL40 294 aaKnown RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 TRBV4-1A0A0J9YWV2 114 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 A0A1W2PRQ8 180 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 HTR3EA5X5Y0 456 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 NPIPB13A6NJU9 1138 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 EFCAB9A8MZ26 197 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 NPIPB4C9JG80 1138 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 ARPC2O15144 300 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 SSX4O60224 188 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 LY6HO94772 140 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 LY6G6DO95868 133 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 H1F0P07305 194 aaKnown RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 T-ENOLP0DO92 83 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 RHCEP18577 417 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 SERPINF1P36955 418 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 CTXN1P60606 82 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 FMODQ06828 376 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 DGCR6Q14129 220 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 GKAP1Q5VSY0 366 aaPredicted RBP11.23□□□□□ -0.61
XRN1-203ENST00000463916 TMPRSS11FQ6ZWK6 438 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 OR4K5Q8NGD3 323 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 PYURFQ96I23 114 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
XRN1-203ENST00000463916 B2RBV5 119 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 GMNNO75496 209 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 OR4A8P0C604 315 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 OR8G3PP0DMU2 310 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 ZNF35P13682 527 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 CDAP32320 146 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 THBS4P35443 961 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 ZNF133P52736 654 aaPredicted RBP11.22□□□□□ -0.61
XRN1-203ENST00000463916 MXRA7P84157 204 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 RAB39AQ14964 217 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 NUP37Q8NFH4 326 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 OR52J3Q8NH60 311 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 FAM46AQ96IP4 442 aaKnown RBP11.22□□□□□ -0.61
XRN1-203ENST00000463916 TSPAN32Q96QS1 320 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 FUZQ9BT04 418 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 ANKRD19PQ9H560 264 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 MAGEL2Q9UJ55 1249 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
XRN1-203ENST00000463916 UGT2A1Q9Y4X1 527 aa11.22□□□□□ -0.61
XRN1-203ENST00000463916 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 H7C417 338 aa11.21□□□□□ -0.61
XRN1-203ENST00000463916 RPL27P61353 136 aaKnown RBP11.21□□□□□ -0.61
XRN1-203ENST00000463916 RAB35Q15286 201 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms