RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 TVP23AA6NH52 213 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 ZNF726A6NNF4 738 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 RRP8O43159 456 aaKnown RBP16.95■□□□□ 0.3
CCDC78-206ENST00000463539 HCCSP53701 268 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 CLDN18P56856 261 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 CLRN1P58418 232 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 PMP22Q01453 160 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 ZNF85Q03923 595 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 FMODQ06828 376 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 CTF1Q16619 201 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 IGFL3Q6UXB1 125 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 SLC16A9Q7RTY1 509 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 TIGD4Q8IY51 512 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 NOXO1Q8NFA2 376 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 OR9K2Q8NGE7 335 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 ABTB1Q969K4 478 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-206ENST00000463539 CPNE4Q96A23 557 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-206ENST00000463539 ADAD1Q96M93 576 aaKnown RBP16.95■□□□□ 0.3
CCDC78-206ENST00000463539 DCBLD2Q96PD2 775 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 BCL7BQ9BQE9 202 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 MRPL13Q9BYD1 178 aaKnown RBP16.95■□□□□ 0.3
CCDC78-206ENST00000463539 YIPF3Q9GZM5 350 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 ZDHHC11Q9H8X9 412 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 ISYNA1Q9NPH2 558 aa16.95■□□□□ 0.3
CCDC78-206ENST00000463539 TFECO14948 347 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-206ENST00000463539 AKAP8O43823 692 aaKnown RBP16.94■□□□□ 0.3
CCDC78-206ENST00000463539 HLA-DQA2P01906 255 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 PGA4P0DJD7 388 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 PGA3P0DJD8 388 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 ZNF708P17019 499 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 ZNF24P17028 368 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 CLDN17P56750 224 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 GLO1Q04760 184 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 CAMK2DQ13557 499 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 SLC17A1Q14916 467 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 SSX1Q16384 188 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 CREB3L2Q70SY1 520 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 RFLNBQ8N5W9 214 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 MEIOBQ8N635 442 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 RBP7Q96R05 134 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 INTS14Q96SY0 518 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 TIMP4Q99727 224 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 SF3B5Q9BWJ5 86 aaKnown RBP16.94■□□□□ 0.3
CCDC78-206ENST00000463539 DEFB127Q9H1M4 99 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 LDAHQ9H6V9 325 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 ISG20L2Q9H9L3 353 aaKnown RBP16.94■□□□□ 0.3
CCDC78-206ENST00000463539 LIPGQ9Y5X9 500 aa16.94■□□□□ 0.3
CCDC78-206ENST00000463539 ATE1O95260 518 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 GPANK1O95872 356 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ACTL6AO96019 429 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 MT-ND5P03915 603 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 GADD45AP24522 165 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ACTA2P62736 377 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ACTG2P63267 376 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 SRYQ05066 204 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ETFDHQ16134 617 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 LIPKQ5VXJ0 399 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 VASNQ6EMK4 673 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 SSX6Q7RTT6 188 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 NEIL3Q8TAT5 605 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 UFD1Q92890 307 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 EXO5Q9H790 373 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 NDUFB11Q9NX14 153 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 PTTG2Q9NZH5 202 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 TRGV5A0A0B4J1U4 118 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 AIREO43918 545 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ITGB2P05107 769 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 CPEP16870 476 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 HSF2Q03933 536 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ACSM1Q08AH1 577 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 BCL2A1Q16548 175 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 THEM4Q5T1C6 240 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 CARD17Q5XLA6 110 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ABLIM2Q6H8Q1 611 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ATCAYQ86WG3 371 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 KLBQ86Z14 1044 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 OR6N2Q8NGY6 317 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 RPL3LQ92901 407 aaKnown RBP16.93■□□□□ 0.3
CCDC78-206ENST00000463539 MRPL48Q96GC5 212 aaKnown RBP16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ZNF845Q96IR2 970 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-206ENST00000463539 FOXN4Q96NZ1 517 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 TTTY10Q9BZA0 68 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 WDR76Q9H967 626 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 MARCH7Q9H992 704 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 BABAM2Q9NXR7 383 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 COPS3Q9UNS2 423 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 COA3Q9Y2R0 106 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-206ENST00000463539 LAMA5O15230 3695 aa16.93■□□□□ 0.3
CCDC78-206ENST00000463539 ZNF670-ZNF695F2Z2N8 137 aa16.92■□□□□ 0.3
CCDC78-206ENST00000463539 KHDRBS3O75525 346 aaKnown RBP16.92■□□□□ 0.3
CCDC78-206ENST00000463539 LALBAP00709 142 aa16.92■□□□□ 0.3
CCDC78-206ENST00000463539 CAPZA2P47755 286 aa16.92■□□□□ 0.3
CCDC78-206ENST00000463539 RPS3AP61247 264 aaKnown RBP16.92■□□□□ 0.3
CCDC78-206ENST00000463539 LSM3P62310 102 aaKnown RBP16.92■□□□□ 0.3
CCDC78-206ENST00000463539 ZNF169Q14929 603 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-206ENST00000463539 TIMM50Q3ZCQ8 353 aa16.92■□□□□ 0.3
CCDC78-206ENST00000463539 C19orf48Q6RUI8 117 aa16.92■□□□□ 0.3
CCDC78-206ENST00000463539 PHC2Q8IXK0 858 aa16.92■□□□□ 0.3
CCDC78-206ENST00000463539 SNX33Q8WV41 574 aa16.92■□□□□ 0.3
CCDC78-206ENST00000463539 ROBO4Q8WZ75 1007 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms