RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 FAM71E2Q8N5Q1 922 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 SUMF2Q8NBJ7 301 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 OR4F15Q8NGB8 312 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 OR10G9Q8NGN4 311 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 OR2G3Q8NGZ4 309 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 OR5B3Q8NH48 314 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 MCOLN3Q8TDD5 553 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 TSEN15Q8WW01 171 aaKnown RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 IL22RA2Q969J5 263 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 TGS1Q96RS0 853 aaKnown RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 BPIFA3Q9BQP9 254 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 FGF20Q9NP95 211 aaPredicted RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 CCNB1IP1Q9NPC3 277 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 MRPL22Q9NWU5 206 aaKnown RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 LYARQ9NX58 379 aaKnown RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 DEC1Q9P2X7 70 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 XCL2Q9UBD3 114 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 CLCF1Q9UBD9 225 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 PCYOX1Q9UHG3 505 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 ZNF225Q9UK10 706 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 ING4Q9UNL4 249 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 ZNF256Q9Y2P7 627 aaPredicted RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 KIF25-AS1Q9Y6Z4 181 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 ADAMTS9Q9P2N4 1935 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 WDR19Q8NEZ3 1342 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 CIB4A0PJX0 185 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 NCF1BA6NI72 391 aaPredicted RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 NCF1CA8MVU1 366 aaPredicted RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 KLLNB2CW77 178 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 ERVV-1B6SEH8 477 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 SIRPB1O00241 398 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 EIF3HO15372 352 aaKnown RBP eCLIP2.22□□□□□ -2.05
VCL-203ENST00000461383 FGFR1OPO95684 399 aaKnown RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 TSPAN13O95857 204 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 IGHV4-34P06331 123 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 ASGR1P07306 291 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 ERCC1P07992 297 aaPredicted RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 MYL2P10916 166 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 CNR1P21554 472 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 CSNK1DP48730 415 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 CX3CR1P49238 355 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 CCR8P51685 355 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 ADARB1P78563 741 aaKnown RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 LIPEQ05469 1076 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 TWF1Q12792 350 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 TCP10Q12799 353 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 PSG7Q13046 419 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 FZD2Q14332 565 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 GPNMBQ14956 572 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 SOHLH1Q5JUK2 328 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 CTRB2Q6GPI1 263 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 FRMPD2BQ6IN97 320 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 TMEM53Q6P2H8 277 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 TTC23LQ6PF05 361 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 ANGPTL8Q6UXH0 198 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 TMEM179Q6ZVK1 233 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 H2AFVQ71UI9 128 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 BIVMQ86UB2 503 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 OAFQ86UD1 273 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 OFCC1Q8IZS5 231 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 GABRG1Q8N1C3 465 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 RNF175Q8N4F7 328 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 COMMD1Q8N668 190 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 BPIFCQ8NFQ6 507 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 OR6X1Q8NH79 312 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 DTX3LQ8TDB6 740 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 RDH5Q92781 318 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 TMEM54Q969K7 222 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 PIK3IP1Q96FE7 263 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 PKNOX2Q96KN3 472 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 PRRC1Q96M27 445 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 P2RX4Q99571 388 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 SH3GL3Q99963 347 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 GABARAPL3Q9BY60 117 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 DEFB127Q9H1M4 99 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 RPF2Q9H7B2 306 aaKnown RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 EML4Q9HC35 981 aaKnown RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 KCNJ16Q9NPI9 418 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 MMP26Q9NRE1 261 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 C20orf96Q9NUD7 363 aaPredicted RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 DDX18Q9NVP1 670 aaKnown RBP2.22□□□□□ -2.05
VCL-203ENST00000461383 HRASLS2Q9NWW9 162 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 SLC25A37Q9NYZ2 338 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 ATRXP46100 2492 aa2.22□□□□□ -2.05
VCL-203ENST00000461383 GLYATL1P3A0A0U1RQE8 302 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 A0A1B0GVI7 797 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 A6NDX4 124 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 SUPT3HB4E1H0 165 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 H0YC42 278 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 H0YIV9 168 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 HUS1O60921 280 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 MOSP00540 346 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 ACSM4P0C7M7 580 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 OR8G3PP0DMU2 310 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 RALBP11234 206 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 CCT6AP40227 531 aaKnown RBP2.21□□□□□ -2.06
VCL-203ENST00000461383 CDKN1BP46527 198 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 RAB9AP51151 201 aa2.21□□□□□ -2.06
VCL-203ENST00000461383 EIF3EP60228 445 aaKnown RBP2.21□□□□□ -2.06
VCL-203ENST00000461383 NUTF2P61970 127 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms