RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 RGS9BPQ6ZS82 235 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 PUSL1Q8N0Z8 303 aaKnown RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 ZNF557Q8N988 423 aaPredicted RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 EIF1ADQ8N9N8 165 aaKnown RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 CCDC148Q8NFR7 591 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 ZFP90Q8TF47 636 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 CNDP1Q96KN2 507 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 C12orf42Q96LP6 360 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 TCEANC2Q96MN5 208 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 MFFQ9GZY8 342 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 NCOR1P1Q9H4R4 102 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 ZNF639Q9UID6 485 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 HPCAL4Q9UM19 191 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 V9GYY5 206 aaPredicted RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 CARMIL3Q8ND23 1372 aa3.65□□□□□ -1.82
CKAP2-204ENST00000459902 CEMIPQ8WUJ3 1361 aa3.65□□□□□ -1.82
CKAP2-204ENST00000459902 ARPC4-TTLL3A0A0A6YYG9 625 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 C1orf105O95561 183 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 ZDHHC11BP0C7U3 371 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 SMIM10L1P0DMW3 83 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 ETS2P15036 469 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 RORAP35398 523 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 HSD17B2P37059 387 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 VHLP40337 213 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 MNAT1P51948 309 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 RPS21P63220 83 aaKnown RBP3.65□□□□□ -1.83
CKAP2-204ENST00000459902 CTAG1AP78358 180 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 ENPEPQ07075 957 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 H2BFWTQ7Z2G1 175 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 H1FOOQ8IZA3 346 aaPredicted RBP3.65□□□□□ -1.83
CKAP2-204ENST00000459902 CYB561D1Q8N8Q1 229 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 FAM184AQ8NB25 1140 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 OR8J1Q8NGP2 316 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 SDR42E1Q8WUS8 393 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 GEMIN6Q8WXD5 167 aaKnown RBP3.65□□□□□ -1.83
CKAP2-204ENST00000459902 SMIM10Q96HG1 83 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 PLEKHA8Q96JA3 519 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 RARRES2Q99969 163 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 GABARAPL3Q9BY60 117 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 LRRC40Q9H9A6 602 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 FN3KRPQ9HA64 309 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 SGK2Q9HBY8 427 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 NECAP2Q9NVZ3 263 aa3.65□□□□□ -1.83
CKAP2-204ENST00000459902 A0A1W2PPV9 198 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 BTBD17A6NE02 478 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 OR52A4PA6NMU1 304 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 ZNF726A6NNF4 738 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 NMT2O60551 498 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 PALMO75781 387 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 SMC2O95347 1197 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 RETP07949 1114 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 ZNF823P16415 610 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 IGFBP3P17936 291 aaPredicted RBP3.64□□□□□ -1.83
CKAP2-204ENST00000459902 OMGP23515 440 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 ATP5C1P36542 298 aaKnown RBP3.64□□□□□ -1.83
CKAP2-204ENST00000459902 UBE2AP49459 152 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 PPIL2Q13356 520 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 IMMTQ16891 758 aaKnown RBP3.64□□□□□ -1.83
CKAP2-204ENST00000459902 TTLL9Q3SXZ7 439 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 KCTD21Q4G0X4 260 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 TTC19Q6DKK2 380 aaPredicted RBP3.64□□□□□ -1.83
CKAP2-204ENST00000459902 CENPPQ6IPU0 288 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 KDM7AQ6ZMT4 941 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 H2AFVQ71UI9 128 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 KRT222Q8N1A0 295 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 SPERTQ8NA61 448 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 OR10G2Q8NGC3 310 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 OR2G2Q8NGZ5 317 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 SLC22A8Q8TCC7 542 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 HSFY1Q96LI6 401 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 SH3GL1Q99961 368 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 UBAP1Q9NZ09 502 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 CHMP5Q9NZZ3 219 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 NPTNQ9Y639 398 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 TET2Q6N021 2002 aaPredicted RBP3.64□□□□□ -1.83
CKAP2-204ENST00000459902 PIKFYVEQ9Y2I7 2098 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 WDR62O43379 1518 aa3.64□□□□□ -1.83
CKAP2-204ENST00000459902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.63□□□□□ -1.83
CKAP2-204ENST00000459902 A0A1W2PPE3 182 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 LRCOL1A6NCL2 159 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 AP3B1O00203 1094 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 CCL21O00585 134 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 ATP1B2P14415 290 aaPredicted RBP3.63□□□□□ -1.83
CKAP2-204ENST00000459902 ZNF24P17028 368 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 EPS15P42566 896 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 GYG1P46976 350 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 SULT1E1P49888 294 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 CCR8P51685 355 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 NCBP2P52298 156 aaKnown RBP eCLIP3.63□□□□□ -1.83
CKAP2-204ENST00000459902 GK3PQ14409 553 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 FAM83EQ2M2I3 478 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 CCDC183Q5T5S1 534 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 SDR9C7Q8NEX9 313 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 OR1L6Q8NGR2 347 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 SHC3Q92529 594 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 EXOSC8Q96B26 276 aaKnown RBP3.63□□□□□ -1.83
CKAP2-204ENST00000459902 IFT74Q96LB3 600 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 TSNARE1Q96NA8 513 aa3.63□□□□□ -1.83
CKAP2-204ENST00000459902 TMEM59Q9BXS4 323 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms