RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GSSP48637 474 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 CTXN1P60606 82 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 UBE2NP61088 152 aaKnown RBP12.35□□□□□ -0.43
HDAC4-205ENST00000454542 FAM98BQ52LJ0 330 aaKnown RBP12.35□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF770Q6IQ21 691 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-205ENST00000454542 C1orf94Q6P1W5 598 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 PGBD2Q6P3X8 592 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 B3GLCTQ6Y288 498 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 RRM2BQ7LG56 351 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 IGFN1Q86VF2 1251 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 NEUROG1Q92886 237 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF75AQ96N20 296 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 SLC38A2Q96QD8 506 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 KATNB1Q9BVA0 655 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 LRMDAQ9H2I8 198 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 NOX3Q9HBY0 568 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 TMEM38BQ9NVV0 291 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 BEX4Q9NWD9 120 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-205ENST00000454542 VNN3Q9NY84 501 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 SLC7A8Q9UHI5 535 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF346Q9UL40 294 aaKnown RBP12.35□□□□□ -0.43
HDAC4-205ENST00000454542 POMPQ9Y244 141 aa12.35□□□□□ -0.43
HDAC4-205ENST00000454542 ROS1P08922 2347 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 IGKV1D-43A0A0B4J1Z2 117 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 TCRBV3S1A0A5B6 114 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 DHRS12A0PJE2 317 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 M0R1B8 84 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 ATP5HO75947 161 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 NDUFB2O95178 105 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 QDPRP09417 244 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 DANCRP0C864 163 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 NR2C1P13056 603 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 CBR1P16152 277 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 CDH11P55287 796 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 CLRN1P58418 232 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 TUBA1BP68363 451 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 TUBA4AP68366 448 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 CHRNB3Q05901 458 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 TOP3AQ13472 1001 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-205ENST00000454542 KEAP1Q14145 624 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 FLOT2Q14254 428 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 GK3PQ14409 553 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 DEFB113Q30KQ7 82 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 MESTQ5EB52 335 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 SPNS3Q6ZMD2 512 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 ZNF813Q6ZN06 617 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 MYPOPQ86VE0 399 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-205ENST00000454542 ARIH2OSQ8N7S6 290 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 FNDC8Q8TC99 324 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 FBXW5Q969U6 566 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 NDEL1Q9GZM8 345 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 NRIP3Q9NQ35 241 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 POFUT2Q9Y2G5 429 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 ADAM18Q9Y3Q7 739 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 UGT2A1Q9Y4X1 527 aa12.34□□□□□ -0.43
HDAC4-205ENST00000454542 DSCAMO60469 2012 aa12.33□□□□□ -0.43
HDAC4-205ENST00000454542 PLCE1Q9P212 2302 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 UNC119BA6NIH7 251 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 A6NIZ1 184 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 OR10H3O60404 316 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 STAMBPO95630 424 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 TXNDC12O95881 172 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 CECR9P0C854 216 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
HDAC4-205ENST00000454542 PAX1P15863 534 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 RASSF2P50749 326 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 RAP1BP61224 184 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 RAP1AP62834 184 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 FMODQ06828 376 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 PGGHGQ32M88 737 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 OR2T5Q6IEZ7 315 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 SLC25A47Q6Q0C1 308 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF620Q6ZNG0 422 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 DTX2Q86UW9 622 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 MDP1Q86V88 176 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 KRTAP1-3Q8IUG1 177 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 LINC00471Q8N535 108 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 SYT14Q8NB59 555 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 OR9Q2Q8NGE9 314 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 OR2T29Q8NH02 315 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 FANK1Q8TC84 345 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 CANT1Q8WVQ1 401 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 NANOS1Q8WY41 292 aaKnown RBP12.33□□□□□ -0.44
HDAC4-205ENST00000454542 PIGTQ969N2 578 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 NABP1Q96AH0 204 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 CCL19Q99731 98 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 DENND2DQ9H6A0 471 aaPredicted RBP12.33□□□□□ -0.44
HDAC4-205ENST00000454542 SEC61A2Q9H9S3 476 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 AURKCQ9UQB9 309 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 CREBBPQ92793 2442 aa12.33□□□□□ -0.44
HDAC4-205ENST00000454542 TNFRSF11BO00300 401 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 AHCYL1O43865 530 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 MGRN1O60291 552 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ENTPD5O75356 428 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms