RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 OR10A3P58181 314 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 P2RY14Q15391 338 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 TAB1Q15750 504 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 SFXN4Q6P4A7 337 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 PAPD4Q6PIY7 484 aaKnown RBP9.65□□□□□ -0.87
PKP4-206ENST00000452162 PAMR1Q6UXH9 720 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 GRINAQ7Z429 371 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 MISPQ8IVT2 679 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 TIGD4Q8IY51 512 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 ZNF511Q8NB15 262 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 IL17RDQ8NFM7 739 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 DUSP19Q8WTR2 217 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 RNF138Q8WVD3 245 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 HGDQ93099 445 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 NEDD4LQ96PU5 975 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 UBL7Q96S82 380 aaPredicted RBP9.65□□□□□ -0.87
PKP4-206ENST00000452162 TTYH2Q9BSA4 534 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 TAS2R10Q9NYW0 307 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 ADAM30Q9UKF2 790 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 H7C1C5 153 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 SLC25A12O75746 678 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 IGHEP01854 428 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 ITGB2P05107 769 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 EDNRAP25101 427 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 GRPRP30550 384 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 PSMB10P40306 273 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 FBXW4P57775 412 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 LCN6P62502 163 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 MADCAM1Q13477 382 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 SGCBQ16585 318 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 PCSK4Q6UW60 755 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 MAMDC2Q7Z304 686 aaPredicted RBP9.64□□□□□ -0.87
PKP4-206ENST00000452162 OR11G2Q8NGC1 345 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 METTL21AQ8WXB1 218 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 HPS1Q92902 700 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 TMEM165Q9HC07 324 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 B3GAT2Q9NPZ5 323 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 MALT1Q9UDY8 824 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 KLHDC2Q9Y2U9 406 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 SPTA1P02549 2419 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 KALRNO60229 2985 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 TRBV2A0A0J9YWF9 115 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 TRBV11-1A0A0K0K1C0 115 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 A8MVM7 634 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 B4DXG7 233 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 GPRIN2O60269 458 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 UCHL1P09936 223 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 ELK1P19419 428 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 EEF1A1P5Q5VTE0 462 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 C1orf140Q5VVS0 124 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 TMEM205Q6UW68 189 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 UNQ9370/PRO34162Q6UXP9 181 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 CDC20BQ86Y33 519 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 OR6V1Q8N148 313 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 OR2T4Q8NH00 348 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 STK35Q8TDR2 534 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 DNAJA3Q96EY1 480 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 IP6K3Q96PC2 410 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 MFRPQ9BY79 579 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 SACM1LQ9NTJ5 587 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 RALYQ9UKM9 306 aaKnown RBP9.64□□□□□ -0.87
PKP4-206ENST00000452162 RASD1Q9Y272 281 aa9.64□□□□□ -0.87
PKP4-206ENST00000452162 CPAMD8Q8IZJ3 1885 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 PCNX3Q9H6A9 2034 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 ANKUB1A6NFN9 424 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 PLA2G10O15496 165 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 GATBO75879 557 aaKnown RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 RENP00797 406 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 COX6A1P12074 109 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 DLX5P56178 289 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SLC25A35Q3KQZ1 300 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 DCAF10Q5QP82 559 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 FAM69AQ5T7M9 428 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 TRILQ7L0X0 811 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 CPEB2Q7Z5Q1 589 aaKnown RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 Q8N402 240 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 OR8K3Q8NH51 312 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 ZNF519Q8TB69 540 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 THAP3Q8WTV1 239 aaPredicted RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 PDCD1LG2Q9BQ51 273 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SLC22A4Q9H015 551 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 C11orf54Q9H0W9 315 aaPredicted RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 ZCCHC4Q9H5U6 513 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SRA1Q9HD15 236 aaKnown RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 INIPQ9NRY2 104 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 CYSLTR2Q9NS75 346 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 LINC00854A0A1B0GVQ3 168 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 ABHD16AO95870 558 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 IGHMP01871 453 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 FAM87AP0C7U9 286 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SLC2A2P11168 524 aaPredicted RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 NAGAP17050 411 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 RAB3BP20337 219 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 CASP3P42574 277 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 HTR3AP46098 478 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 SUMO3P55854 103 aaPredicted RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 NANOS3P60323 173 aaKnown RBP9.63□□□□□ -0.87
PKP4-206ENST00000452162 SELENBP1Q13228 472 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 IL18Q14116 193 aa9.63□□□□□ -0.87
PKP4-206ENST00000452162 CEP78Q5JTW2 689 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms