RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 PRKNO60260 465 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 MRPL33O75394 65 aaKnown RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 ZNF44P15621 663 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 ZNF93P35789 620 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 H1FNTQ75WM6 255 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 ZNF784Q8NCA9 323 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 PAQR8Q8TEZ7 354 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 EDAQ92838 391 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 METTL9Q9H1A3 318 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 C20orf85Q9H1P6 137 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 WIF1Q9Y5W5 379 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 KCNE3Q9Y6H6 103 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 LOC100289279A0A1B0GTE1 492 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 M0QYG6 137 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 ALOX12BO75342 701 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 CER1O95813 267 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 BLVRBP30043 206 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 PPICP45877 212 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 EVX1P49640 407 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 TAS2R46P59540 309 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 NKAIN1Q4KMZ8 207 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 VWA2Q5GFL6 755 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 RAB11FIP2Q7L804 512 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 LILRB2Q8N423 598 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 CLEC1AQ8NC01 280 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 ZFAND1Q8TCF1 268 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 TMEM43Q9BTV4 400 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 SAV1Q9H4B6 383 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 EMC7Q9NPA0 242 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 A4GNTQ9UNA3 340 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 PCDHGA1Q9Y5H4 931 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 PRICKLE3O43900 615 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 SSR4P51571 173 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 TGFBR3Q03167 851 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 AGERQ15109 404 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 CD276Q5ZPR3 534 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 OR1S1Q8NH92 325 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 STK35Q8TDR2 534 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 MRGPRX3Q96LB0 322 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 CCNL2Q96S94 520 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 SULT4A1Q9BR01 284 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 SLCO5A1Q9H2Y9 848 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 NELFAQ9H3P2 528 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 PRDM7Q9NQW5 492 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 WSB2Q9NYS7 404 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 CGGBP1Q9UFW8 167 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 SIT1Q9Y3P8 196 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 A0A0D9SG52 128 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 SLC22A23A1A5C7 686 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 ANKRD61A6NGH8 418 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 GABARAPH6UMI1 98 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 ATG12O94817 140 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 ICAM2P13598 275 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 PPP3CBP16298 524 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 SDHAP31040 664 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 P2RX1P51575 399 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 GABREP78334 506 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 ACTBL2Q562R1 376 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 RFPL4BQ6ZWI9 263 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 KLHDC8BQ8IXV7 354 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 IL1F10Q8WWZ1 152 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 TSSK2Q96PF2 358 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 CTRCQ99895 268 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 EMC6Q9BV81 110 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 RBM38Q9H0Z9 239 aaKnown RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 BOKQ9UMX3 212 aaPredicted RBP9.54□□□□□ -0.88
CTC1-202ENST00000449476 NEU3Q9UQ49 428 aa9.54□□□□□ -0.88
CTC1-202ENST00000449476 MSX1P28360 303 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 EIF1P41567 113 aaKnown RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 DGCR2P98153 550 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 MLC1Q15049 377 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 SYS1Q8N2H4 156 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 OR13C5Q8NGS8 318 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 OR52I2Q8NH67 350 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 MIB2Q96AX9 1013 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 DCLRE1CQ96SD1 692 aaKnown RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 PLA2G12AQ9BZM1 189 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 MCOLN1Q9GZU1 580 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 EMC3Q9P0I2 261 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 NXT1Q9UKK6 140 aaKnown RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 AKR7A3O95154 331 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 SLC2A1P11166 492 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 CD53P19397 219 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 RPS27P42677 84 aaKnown RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 RPS27AP62979 156 aaKnown RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 UBA52P62987 128 aaKnown RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 ARG2P78540 354 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 TIAL1Q01085 375 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTC1-202ENST00000449476 BDH1Q02338 343 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 YOD1Q5VVQ6 348 aaPredicted RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 CREB3L2Q70SY1 520 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 ADGRE4PQ86SQ3 457 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 NKAIN3Q8N8D7 197 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 SLIRPQ9GZT3 109 aaKnown RBP9.53□□□□□ -0.88
CTC1-202ENST00000449476 DOCK5Q9H7D0 1870 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 THSD7AQ9UPZ6 1657 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 PRAMEF25A6NGN4 478 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 S100PP25815 95 aa9.53□□□□□ -0.88
CTC1-202ENST00000449476 TAS2R20P59543 309 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms