RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ALG12Q9BV10 488 aa15.88■□□□□ 0.13
TRAPPC4-203ENST00000447216 ADI1Q9BV57 179 aa15.88■□□□□ 0.13
TRAPPC4-203ENST00000447216 TEX12Q9BXU0 123 aa15.88■□□□□ 0.13
TRAPPC4-203ENST00000447216 RASSF4Q9H2L5 321 aa15.88■□□□□ 0.13
TRAPPC4-203ENST00000447216 UPB1Q9UBR1 384 aa15.88■□□□□ 0.13
TRAPPC4-203ENST00000447216 ZNF629Q9UEG4 869 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC4-203ENST00000447216 NDRG4Q9ULP0 352 aaKnown RBP15.88■□□□□ 0.13
TRAPPC4-203ENST00000447216 HCFC1P51610 2035 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 IGKV1D-43A0A0B4J1Z2 117 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 FAM183AA6NL82 134 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 FAM90A27PA6NNH2 459 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 H0YJX3 145 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 SLC16A6O15403 523 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 PRKYO43930 277 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 KRT33AO76009 404 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 RENP00797 406 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 IFNGP01579 166 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 QDPRP09417 244 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 CD8BP10966 210 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 CHRNB4P30926 498 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 CAPGP40121 348 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 FAPQ12884 760 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 C9orf135Q5VTT2 229 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 MTFR2Q6P444 385 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 LRFN4Q6PJG9 635 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 TCEANCQ8N8B7 351 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 POMGNT2Q8NAT1 580 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 OR9Q1Q8NGQ5 310 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 OTULINQ96BN8 352 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 NMD3Q96D46 503 aaKnown RBP15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 ZNF837Q96EG3 531 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 LRR1Q96L50 414 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 TSSK2Q96PF2 358 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 SLC38A2Q96QD8 506 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 IL4I1Q96RQ9 567 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 DDOQ99489 341 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 ULBP2Q9BZM5 246 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 LINC00470Q9BZP3 86 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 SYT4Q9H2B2 425 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 PIGMQ9H3S5 423 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 RERGLQ9H628 205 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 RPRD1BQ9NQG5 326 aaKnown RBP15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 COQ3Q9NZJ6 369 aa15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 VSX1Q9NZR4 365 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC4-203ENST00000447216 PRR14LQ5THK1 2151 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 CENPBD1B2RD01 187 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 ZNF3P17036 446 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 PCYT1AP49585 367 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 ROR2Q01974 943 aaKnown RBP15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 ITGADQ13349 1161 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 HIST3H3Q16695 136 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 FBXW9Q5XUX1 488 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 ZNF474Q6S9Z5 364 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 ASB5Q8WWX0 329 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 NSMAFQ92636 917 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 MCHR2Q969V1 340 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 FOXN4Q96NZ1 517 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 RBP7Q96R05 134 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 SNX18Q96RF0 628 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 HCAR1Q9BXC0 346 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 CRLF2Q9HC73 371 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 GPR35Q9HC97 309 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 SRA1Q9HD15 236 aaKnown RBP15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 B3GAT2Q9NPZ5 323 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 HINT3Q9NQE9 182 aaKnown RBP15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 IMPAD1Q9NX62 359 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 ZNF226Q9NYT6 803 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 AASSQ9UDR5 926 aa15.86■□□□□ 0.13
TRAPPC4-203ENST00000447216 FLNCQ14315 2725 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 OR6C65A6NJZ3 312 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 ZNF587BE7ETH6 402 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 DCTN6O00399 190 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 MSTNO14793 375 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 TLX2O43763 284 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 SLC16A7O60669 478 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 GNAO1P09471 354 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 CLUP10909 449 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 CTLA4P16410 223 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 CDC42P60953 191 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 KEAP1Q14145 624 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 ETFDHQ16134 617 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 TTC23Q5W5X9 447 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 PLBD1Q6P4A8 553 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 SLC25A47Q6Q0C1 308 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 BCDIN3DQ7Z5W3 292 aaKnown RBP15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 MRGPRGQ86SM5 289 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 CPOQ8IVL8 374 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 BBS1Q8NFJ9 593 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 ITLN2Q8WWU7 325 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 RBM24Q9BX46 236 aaKnown RBP15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 PRRG3Q9BZD7 231 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 NUAK2Q9H093 628 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 ASB6Q9NWX5 421 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 MALT1Q9UDY8 824 aa15.85■□□□□ 0.13
TRAPPC4-203ENST00000447216 NKX2-6A6NCS4 301 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 FAM171A2A8MVW0 826 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 PRR23D1E9PI22 279 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 J3QKU1 62 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 DHHO43323 396 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 SEC14L2O76054 403 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms