RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SECTM1Q8WVN6 248 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SLAMF9Q96A28 289 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ZNF649Q9BS31 505 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 MFRPQ9BY79 579 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 MSRAQ9UJ68 235 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 KCNE3Q9Y6H6 103 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TAAR5O14804 337 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 EIF4E2O60573 245 aaKnown RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 LILRB5O75023 590 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 GABRA3P34903 492 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 DPY19L2P2Q6ZN68 376 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 OR5M8Q8NGP6 311 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CXorf40AQ8TE69 158 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 GPR62Q9BZJ7 368 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 FN3KRPQ9HA64 309 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 COL24A1Q17RW2 1714 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TMEM272A0A1B0GTI8 110 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 FAM221BA6H8Z2 402 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 K7EPK0 472 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 FBXO24O75426 580 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 LIPCP11150 499 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CKBP12277 381 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 RBP2P50120 134 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ZNF616Q08AN1 781 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SKP2Q13309 424 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 SLC18B1Q6NT16 456 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 FAM71E2Q8N5Q1 922 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 RCBTB1Q8NDN9 531 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 NUP43Q8NFH3 380 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 DMBX1Q8NFW5 382 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 RGP1Q92546 391 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 RHBGQ9H310 441 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 AKAP6Q13023 2319 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ITGB4P16144 1822 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 IFNA21P01568 189 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 ZNF750Q32MQ0 723 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CCSMST1Q4G0I0 132 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 EDARADDQ8WWZ3 215 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 FAM46BQ96A09 425 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CPEB1Q9BZB8 566 aaKnown RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 SIRT3Q9NTG7 399 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 G3V3Q6 166 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 COX18Q8N8Q8 333 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 RAB7BQ96AH8 199 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TMEM68Q96MH6 324 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 LYSMD1Q96S90 227 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 USP36Q9P275 1121 aaKnown RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 ABT1Q9ULW3 272 aaKnown RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 CCL15-CCL14A0A0B4J2E2 113 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 XKRYO14609 159 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TBX19O60806 448 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 NPY4RP50391 375 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 CCL15Q16663 113 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 TTLL10Q6ZVT0 673 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 PNLDC1Q8NA58 520 aaKnown RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 MBD1Q9UIS9 605 aaPredicted RBP4.6□□□□□ -1.67
HERC1-201ENST00000443617 WASF3Q9UPY6 502 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 DHDHQ9UQ10 334 aa4.6□□□□□ -1.67
HERC1-201ENST00000443617 MIA3Q5JRA6 1907 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ZNF705GA8MUZ8 300 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 BPIFB2Q8N4F0 458 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 WDR45Q9Y484 360 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 TBC1D3EA0A087X179 549 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CPED1A4D0V7 1026 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 PGAM2P15259 253 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 AMY2BP19961 511 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 TRHRP34981 398 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 SNRPNP63162 240 aaKnown RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 SRSF3P84103 164 aaKnown RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 GALNT16Q8N428 558 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 NAXEQ8NCW5 288 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ZNF740Q8NDX6 193 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 OR14K1Q8NGZ2 314 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 KLF16Q9BXK1 252 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 J3QRE1 110 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 KCNAB3O43448 404 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CD1AP06126 327 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 SFTPCP11686 197 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CTSOP43234 321 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 ELOCQ15369 112 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 NKAIN2Q5VXU1 208 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 C22orf39Q6P5X5 142 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 FAM199XQ6PEV8 388 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 ST6GALNAC2Q9UJ37 374 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ATG4BQ9Y4P1 393 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 KIAA0355O15063 1070 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ZNF354AO60765 605 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 C1orf189Q5VU69 101 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 SLC22A25Q6T423 547 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 SLC16A9Q7RTY1 509 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CSNK1A1LQ8N752 337 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 OVCA2Q8WZ82 227 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ZNF223Q9UK11 482 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 RAB22AQ9UL26 194 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CDC42EP2O14613 210 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 PRKRAO75569 313 aaKnown RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 OR13C7P0DN81 318 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 NR2C1P13056 603 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 NDUFB7P17568 137 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 AVPR2P30518 371 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms