RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 HSPB2A8KAH6 182 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF264O43296 627 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 CXCL13O43927 109 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC2A10O95528 541 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ATP1B1P05026 303 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 TMIGD3P0DMS9 266 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 MSX1P28360 303 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 PRKAR1BP31321 381 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 EIF1P41567 113 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 MTNR1AP48039 350 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 CLDN15P56746 228 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 TAS2R41P59536 307 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 Q0VFX4 171 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 HSPB2Q16082 182 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 PDZK1Q5T2W1 519 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF322Q6U7Q0 402 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ARHGEF39Q8N4T4 335 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR4N2Q8NGD1 307 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 COQ7Q99807 217 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF426Q9BUY5 554 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 HCAR1Q9BXC0 346 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 PIGUQ9H490 435 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 CYSLTR2Q9NS75 346 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 FBXO9Q9UK97 447 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 SSR3Q9UNL2 185 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 WIF1Q9Y5W5 379 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 C7orf66A4D0T2 115 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 TUBAL3A6NHL2 446 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 GABRPO00591 440 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 HPGDSO60760 199 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 C1QBP02746 253 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 HTR2AP28223 471 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 RPL4P36578 427 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 SMIM11AP58511 58 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 CSNK2A1P68400 391 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 FAPQ12884 760 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 KLHL22Q53GT1 634 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR2A2Q6IF42 318 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 TYW3Q6IPR3 259 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 MFSD12Q6NUT3 480 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZCCHC12Q6PEW1 402 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 VRK2Q86Y07 508 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 APCDD1LQ8NCL9 501 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 GNPDA2Q8TDQ7 276 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF721Q8TF20 911 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC35A4Q96G79 324 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR7D2Q96RA2 312 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 DDOQ99489 341 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 TTYH2Q9BSA4 534 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 GHITMQ9H3K2 345 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 NIPAL2Q9H841 368 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 TMCC3Q9ULS5 477 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 ICAM5Q9UMF0 924 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 GPR52Q9Y2T5 361 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 LAMA1P25391 3075 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 CACNA1DQ01668 2161 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR6C70A6NIJ9 312 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 PIP5K1CO60331 668 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 WDR1O75083 606 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 NCR1O76036 304 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 GSTM3P21266 225 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 MYL9P24844 172 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 NOS3P29474 1203 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 UBE2NP61088 152 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 PPP3R1P63098 170 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 TGFBR3Q03167 851 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 SCN1BQ07699 218 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 DUSP5Q16690 384 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 THOC7Q6I9Y2 204 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 CNIH2Q6PI25 160 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 GDF7Q7Z4P5 450 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 WFDC8Q8IUA0 241 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 CMIPQ8IY22 773 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 C9orf62Q8N4C0 152 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR4F15Q8NGB8 312 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 OSTF1Q92882 214 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 KCTD7Q96MP8 289 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 KCNN2Q9H2S1 579 aa6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 KRCC1Q9NPI7 259 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-208ENST00000442054 IDH3BO43837 385 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 FCMRO60667 390 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 PTP4A3O75365 173 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC43A1O75387 559 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 ELK1P19419 428 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 POU1F1P28069 291 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 PTGER4P35408 488 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 DSCR4P56555 118 aaPredicted RBP6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 RPS11P62280 158 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 MGAT2Q10469 447 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 PRICKLE4Q2TBC4 344 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 FAM209AQ5JX71 171 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 C1orf185Q5T7R7 199 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 RSBN1Q5VWQ0 802 aaPredicted RBP6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC27A4Q6P1M0 643 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 IGFL3Q6UXB1 125 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 PAMR1Q6UXH9 720 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 LINC00114Q6XXX2 140 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 MBOAT2Q6ZWT7 520 aa6.63□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR2L13Q8N349 312 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms