RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SLC16A7O60669 478 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 CTLA4P16410 223 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 CARTPTQ16568 116 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 ARL9Q6T311 187 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 SLC35D2Q76EJ3 337 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 VASH2Q86V25 355 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 SNX33Q8WV41 574 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 EMC6Q9BV81 110 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 TPK1Q9H3S4 243 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 SIAEQ9HAT2 523 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 SNTG1Q9NSN8 517 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 B9D1Q9UPM9 204 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 SLC22A23A1A5C7 686 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 PINLYPA6NC86 204 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 NPIPA5E9PKD4 350 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 RAMP1O60894 148 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 TGM4P49221 684 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 RORCP51449 518 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 BDH1Q02338 343 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 ABHD17BQ5VST6 288 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 JMJD6Q6NYC1 403 aaPredicted RBP18.92■□□□□ 0.62
PTPRF-207ENST00000436724 CD200R1LQ6Q8B3 271 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 CCBE1Q6UXH8 406 aaPredicted RBP18.92■□□□□ 0.62
PTPRF-207ENST00000436724 LINC00696Q6ZRV3 163 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 GPALPP1Q8IXQ4 340 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 SLC25A43Q8WUT9 341 aaPredicted RBP18.92■□□□□ 0.62
PTPRF-207ENST00000436724 ASB10Q8WXI3 467 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 THAP4Q8WY91 577 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 CEP19Q96LK0 163 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 SIGLEC12Q96PQ1 595 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 NPIPA1Q9UND3 350 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 TRAPPC4Q9Y296 219 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 FAM186AA6NE01 2351 aa18.92■□□□□ 0.62
PTPRF-207ENST00000436724 LRRC3CA6NJW4 275 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 CD8B2A6NJW9 211 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 CD8BP10966 210 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 PSKH1P11801 424 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 CENPAP49450 140 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 NOVA1P51513 510 aaKnown RBP18.91■□□□□ 0.62
PTPRF-207ENST00000436724 P2RY4P51582 365 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 TPTEP56180 551 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 GPAT4Q86UL3 456 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 PELI1Q96FA3 418 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 ACOXLQ9NUZ1 547 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 C14orf119Q9NWQ9 140 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 PLA2G3Q9NZ20 509 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 VSX1Q9NZR4 365 aaPredicted RBP18.91■□□□□ 0.62
PTPRF-207ENST00000436724 TEKT2Q9UIF3 430 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 GNG8Q9UK08 70 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 ING1Q9UK53 422 aaPredicted RBP18.91■□□□□ 0.62
PTPRF-207ENST00000436724 SMIM30A4D0T7 59 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 TM4SF5O14894 197 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 NEURL1O76050 574 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 CSRP1P21291 193 aaKnown RBP18.91■□□□□ 0.62
PTPRF-207ENST00000436724 FMODQ06828 376 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 SLC3A1Q07837 685 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 AIMP2Q13155 320 aaKnown RBP18.91■□□□□ 0.62
PTPRF-207ENST00000436724 CDONQ4KMG0 1287 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 SLC16A9Q7RTY1 509 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 PXKQ7Z7A4 578 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.91■□□□□ 0.62
PTPRF-207ENST00000436724 YRDCQ86U90 279 aaKnown RBP18.91■□□□□ 0.62
PTPRF-207ENST00000436724 CCDC32Q9BV29 185 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 HES7Q9BYE0 225 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 FAM117AQ9C073 453 aa18.91■□□□□ 0.62
PTPRF-207ENST00000436724 SULT2B1O00204 365 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 GABRPO00591 440 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 CDRT1O95170 752 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 CLEC2LP0C7M8 214 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 DPY19L4Q7Z388 723 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 CLEC1AQ8NC01 280 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 OR6N2Q8NGY6 317 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 KIAA1143Q96AT1 154 aaPredicted RBP18.9■□□□□ 0.62
PTPRF-207ENST00000436724 FKBP7Q9Y680 259 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 PTPRZ1P23471 2315 aaPredicted RBP18.9■□□□□ 0.62
PTPRF-207ENST00000436724 CACNA1CQ13936 2221 aa18.9■□□□□ 0.62
PTPRF-207ENST00000436724 H0YC42 278 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 SSX4O60224 188 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 HLA-DQA2P01906 255 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 ACTA2P62736 377 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 ACTG2P63267 376 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 TMEM91Q6ZNR0 172 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 ASCL5Q7RTU5 278 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 MIB2Q96AX9 1013 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 MARCH7Q9H992 704 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 HDGFL3Q9Y3E1 203 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 V9GYH0 126 aa18.89■□□□□ 0.62
PTPRF-207ENST00000436724 IGLV1-36A0A0B4J1U3 117 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 TRDV1A0A1B0GX56 115 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 RGS5O15539 181 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 FZD7O75084 574 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 WDPCPO95876 746 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 HLA-DPB1P04440 258 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 CEACAM1P13688 526 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 CD82P27701 267 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 SDC2P34741 201 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 PSMB10P40306 273 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 DAP3P51398 398 aaKnown RBP18.89■□□□□ 0.61
PTPRF-207ENST00000436724 BIDP55957 195 aa18.89■□□□□ 0.61
PTPRF-207ENST00000436724 DEFA1P59665 94 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms