RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ATP1B2P14415 290 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 ZNF32P17041 273 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 IGFBP3P17936 291 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 RAB3BP20337 219 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 RRM2P31350 389 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 CASP14P31944 242 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 OTX1P32242 354 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 RDXP35241 583 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 CXCL5P42830 114 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 RPS10P46783 165 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 PPOXP50336 477 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ARFIP1P53367 373 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ACTR3P61158 418 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ZNF92Q03936 586 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 LRRC74AQ0VAA2 488 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 PDIA2Q13087 525 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 UNC119Q13432 240 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 AQP6Q13520 282 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 GINS1Q14691 196 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 QPRTQ15274 297 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 SHHQ15465 462 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 RABL6Q3YEC7 729 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 VPS26BQ4G0F5 336 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 C5orf47Q569G3 176 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 C1orf94Q6P1W5 598 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 TMEM107Q6UX40 140 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 LYPD2Q6UXB3 125 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 STRADAQ7RTN6 431 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 DHDDSQ86SQ9 333 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 OAFQ86UD1 273 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 MFSD6LQ8IWD5 586 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 PIANPQ8IYJ0 282 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 PRSS58Q8IYP2 241 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ZNF433Q8N7K0 673 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 OR4F6Q8NGB9 312 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 OR1L4Q8NGR5 311 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ZNF596Q8TC21 504 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ACER1Q8TDN7 264 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 CREB3L1Q96BA8 519 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 RPUSD4Q96CM3 377 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 RNF185Q96GF1 192 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 CNDP1Q96KN2 507 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 BMFQ96LC9 184 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ZNF578Q96N58 590 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 ZNF285Q96NJ3 590 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 HDHD3Q9BSH5 251 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 NDFIP1Q9BT67 221 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 RPP21Q9H633 154 aaKnown RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 HMG20AQ9NP66 347 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 DEC1Q9P2X7 70 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 ZNF629Q9UEG4 869 aaPredicted RBP1.35□□□□□ -2.19
CDC40-204ENST00000431461 TBX21Q9UL17 535 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 PSG11Q9UQ72 335 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 TRAPPC4Q9Y296 219 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 TMEM14AQ9Y6G1 99 aa1.35□□□□□ -2.19
CDC40-204ENST00000431461 IGHV3-74A0A0B4J1X5 117 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 CCDC169A6NNP5 214 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 C9JVG2 144 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 INS-IGF2F8WCM5 200 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 ANGPTL7O43827 346 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 CDC40O60508 579 aaKnown RBP eCLIP1.34□□□□□ -2.19
CDC40-204ENST00000431461 EEDO75530 441 aaKnown RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 VAMP5O95183 116 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 C6orf47O95873 294 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 HLA-DPB1P04440 258 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 SERPIND1P05546 499 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 CRYGBP07316 175 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 ETS2P15036 469 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 KITLGP21583 273 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 VSX2P58304 361 aaPredicted RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 PLP1P60201 277 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 YWHAGP61981 247 aaKnown RBP eCLIP1.34□□□□□ -2.19
CDC40-204ENST00000431461 TWF1Q12792 350 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 ERCC8Q13216 396 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 EBI3Q14213 229 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 PSG5Q15238 335 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 IRF4Q15306 451 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 PGGHGQ32M88 737 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 CCNJQ5T5M9 372 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 ANKRD22Q5VYY1 191 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 CNIH2Q6PI25 160 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 TEX43Q6ZNM6 134 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 CENPQQ7L2Z9 268 aaPredicted RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 LHFPL3Q86UP9 236 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 UBALD2Q8IYN6 164 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 NOXO1Q8NFA2 376 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 KCNG3Q8TAE7 436 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 RAB3IL1Q8TBN0 382 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 TMEM54Q969K7 222 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 NTAN1Q96AB6 310 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 SGK3Q96BR1 496 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 RASD2Q96D21 266 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 DNAJC1Q96KC8 554 aaKnown RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 LINC00477Q96M19 166 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 PANX2Q96RD6 677 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 SPIN2AQ99865 258 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 SPIN2BQ9BPZ2 258 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 TCHPQ9BT92 498 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 GABARAPL3Q9BY60 117 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 MRPL37Q9BZE1 423 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms