RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ANGPT2O15123 496 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 DHHO43323 396 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 MGRN1O60291 552 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 SNAP29O95721 258 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 CH25HO95992 272 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 PTHP01270 115 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 IGHG1P01857 330 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 HIST1H2ABP04908 130 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 PGA4P0DJD7 388 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 PGA3P0DJD8 388 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 SEC24CP53992 1094 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 MAD2L1BPQ15013 274 aaPredicted RBP12.77□□□□□ -0.37
MSH5-208ENST00000429846 SLC36A2Q495M3 483 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 HIST3H2AQ7L7L0 130 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 HDDC2Q7Z4H3 204 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 NANOGNBQ7Z5D8 188 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 LRP11Q86VZ4 500 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 MEX3DQ86XN8 651 aaKnown RBP12.77□□□□□ -0.37
MSH5-208ENST00000429846 SLC30A7Q8NEW0 376 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 CLDND2Q8NHS1 167 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 DYDC1Q8WWB3 177 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 HIST1H2ACQ93077 130 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 TMEM186Q96B77 213 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 CDH20Q9HBT6 801 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 ZNF275Q9NSD4 429 aaPredicted RBP12.77□□□□□ -0.37
MSH5-208ENST00000429846 DUSP13Q9UII6 198 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 SLC7A7Q9UM01 511 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 TRIM33Q9UPN9 1127 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 ANK2Q01484 3957 aa12.77□□□□□ -0.37
MSH5-208ENST00000429846 IGLV3-9A0A075B6K5 115 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 BCL10O95999 233 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 THY1P04216 161 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 MSMBP08118 114 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 ASAH2BP0C7U1 165 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 UMPSP11172 480 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 ITGA2P17301 1181 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 TCN1P20061 433 aaPredicted RBP12.76□□□□□ -0.37
MSH5-208ENST00000429846 CD247P20963 164 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 COL8A2P25067 703 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 PCGF2P35227 344 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 KLF3P57682 345 aaPredicted RBP12.76□□□□□ -0.37
MSH5-208ENST00000429846 MTPNP58546 118 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 MELKQ14680 651 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 NKPD1Q17RQ9 610 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 PCGF3Q3KNV8 242 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 LRFN4Q6PJG9 635 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 TEX29Q8N6K0 151 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 OR1J2Q8NGS2 313 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 SLC26A7Q8TE54 656 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 SNX33Q8WV41 574 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 ZFAND2BQ8WV99 257 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 ATP6V1G3Q96LB4 118 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 BCL2L14Q9BZR8 327 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
MSH5-208ENST00000429846 SLCO1C1Q9NYB5 712 aa12.76□□□□□ -0.37
MSH5-208ENST00000429846 C17orf100A8MU93 164 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 KPNA4O00629 521 aaPredicted RBP12.75□□□□□ -0.37
MSH5-208ENST00000429846 RP2O75695 350 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 NCR1O76036 304 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 LYPD3O95274 346 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 IGF2P01344 180 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 QDPRP09417 244 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 PATE4P0C8F1 98 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 NAT2P11245 290 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 ZNF250P15622 560 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 ZNF84P51523 738 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 CLRN1P58418 232 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 HIST3H3Q16695 136 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 SLC16A14Q7RTX9 510 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 NOXO1Q8NFA2 376 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 OR4K5Q8NGD3 323 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 OR51F2Q8NH61 342 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 VANGL1Q8TAA9 524 aaPredicted RBP12.75□□□□□ -0.37
MSH5-208ENST00000429846 FGFBP3Q8TAT2 258 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 ZNF519Q8TB69 540 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 YIPF5Q969M3 257 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 SH3GL3Q99963 347 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 POLR2J2Q9GZM3 115 aaKnown RBP12.75□□□□□ -0.37
MSH5-208ENST00000429846 POLR2J3Q9H1A7 115 aaKnown RBP12.75□□□□□ -0.37
MSH5-208ENST00000429846 LRMDAQ9H2I8 198 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 RNF121Q9H920 327 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 HINT3Q9NQE9 182 aaKnown RBP12.75□□□□□ -0.37
MSH5-208ENST00000429846 HIF1ANQ9NWT6 349 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 NKIRAS2Q9NYR9 191 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 STX18Q9P2W9 335 aaKnown RBP12.75□□□□□ -0.37
MSH5-208ENST00000429846 FZR1Q9UM11 496 aa12.75□□□□□ -0.37
MSH5-208ENST00000429846 IQCMA0A1B0GVH7 501 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 A0A1W2PRG6 482 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 FAM157AC9JC47 383 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 MCIDASD6RGH6 385 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 PPIHO43447 177 aaKnown RBP12.74□□□□□ -0.37
MSH5-208ENST00000429846 MT-ND5P03915 603 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 FAM157BP0CG42 384 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 GAAP10253 952 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 NR2C1P13056 603 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 ANPEPP15144 967 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 RAD52P43351 418 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms