RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 OR6X1Q8NH79 312 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 ZNF566Q969W8 418 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 MOGAT1Q96PD6 335 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 OR52B2Q96RD2 323 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 BCL2L14Q9BZR8 327 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 ZNF665Q9H7R5 613 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 NKIRAS1Q9NYS0 192 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 ZNF224Q9NZL3 707 aa11.22□□□□□ -0.61
HLA-F-219ENST00000429294 LOC105371242A0A075B767 164 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 CLDN25C9JDP6 229 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 J3QLI3 93 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 WIPF1O43516 503 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 RNF13O43567 381 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 RRP9O43818 475 aaKnown RBP11.21□□□□□ -0.61
HLA-F-219ENST00000429294 HIST1H2ABP04908 130 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 PATE4P0C8F1 98 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.61
HLA-F-219ENST00000429294 MAGEB1P43366 347 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 CDH12P55289 794 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 MVKQ03426 396 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 SCARB2Q14108 478 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 HFEQ30201 348 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 HIST3H2AQ7L7L0 130 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 BPIFB2Q8N4F0 458 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 ICA1LQ8NDH6 482 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 ZNF519Q8TB69 540 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 NANPQ8TBE9 248 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 RAB1CQ92928 201 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 HIST1H2ACQ93077 130 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 TMEM38BQ9NVV0 291 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 NKIRAS2Q9NYR9 191 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 ANGPT4Q9Y264 503 aa11.21□□□□□ -0.61
HLA-F-219ENST00000429294 MEGF8Q7Z7M0 2845 aa11.21□□□□□ -0.62
HLA-F-219ENST00000429294 PKD1L1Q8TDX9 2849 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 IGHV1-69-2A0A0G2JMI3 117 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 LRRN3E7EW58 273 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 POLR3GO15318 223 aaPredicted RBP11.2□□□□□ -0.62
HLA-F-219ENST00000429294 DHHO43323 396 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 ATP8B1O43520 1251 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 FMO6PO60774 539 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 CLPTM1O96005 669 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 ZNF250P15622 560 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 GATA3P23771 443 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 FPR2P25090 351 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 AQP1P29972 269 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 CRYBB2P43320 205 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 LRIF1Q5T3J3 769 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 AVPI1Q5T686 147 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 DCAF12L2Q5VW00 463 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 ZNF613Q6PF04 617 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 UNQ6126/PRO20091Q6UXV3 157 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 NHLRC1Q6VVB1 395 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 SLC16A14Q7RTX9 510 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 ZNF584Q8IVC4 421 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 HIPK4Q8NE63 616 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 TMEM54Q969K7 222 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 ZBTB9Q96C00 473 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 SPDL1Q96EA4 605 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 SLC25A44Q96H78 314 aaPredicted RBP11.2□□□□□ -0.62
HLA-F-219ENST00000429294 MCHR1Q99705 422 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 SH3GL3Q99963 347 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 KCNN2Q9H2S1 579 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 OR51B6Q9H340 312 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 TMEM38AQ9H6F2 299 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 SAP30LQ9HAJ7 183 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 NANSQ9NR45 359 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 SLC25A37Q9NYZ2 338 aa11.2□□□□□ -0.62
HLA-F-219ENST00000429294 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.2□□□□□ -0.62
HLA-F-219ENST00000429294 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.2□□□□□ -0.62
HLA-F-219ENST00000429294 V9GYY5 206 aaPredicted RBP11.2□□□□□ -0.62
HLA-F-219ENST00000429294 IGLV3-9A0A075B6K5 115 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 PLPP2O43688 288 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 CHP2O43745 196 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 MGRN1O60291 552 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 ERLIN1O75477 346 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 SNAP29O95721 258 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 CH25HO95992 272 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 IGHG1P01857 330 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 EGR1P18146 543 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 APLNRP35414 380 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 ZNF84P51523 738 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 ARFIP2P53365 341 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 SLC18A1P54219 525 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 UCP2P55851 309 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 CLRN1P58418 232 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 HSF2Q03933 536 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 ZP4Q12836 540 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 NRN1LQ496H8 165 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 FAM209AQ5JX71 171 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 TTC33Q6PID6 262 aaPredicted RBP11.19□□□□□ -0.62
HLA-F-219ENST00000429294 RBMS3Q6XE24 437 aaKnown RBP11.19□□□□□ -0.62
HLA-F-219ENST00000429294 C1QL2Q7Z5L3 287 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 RETREG3Q86VR2 466 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 COMTD1Q86VU5 262 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 RBM15BQ8NDT2 890 aaKnown RBP11.19□□□□□ -0.62
HLA-F-219ENST00000429294 CPEB3Q8NE35 698 aaKnown RBP11.19□□□□□ -0.62
HLA-F-219ENST00000429294 OR4K5Q8NGD3 323 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 ELMOD3Q96FG2 381 aa11.19□□□□□ -0.62
HLA-F-219ENST00000429294 PARD6BQ9BYG5 372 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms