RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 LOC390937A0A1W2PQ73 354 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 NPIPB13A6NJU9 1138 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 NPIPB4C9JG80 1138 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 IFNW1P05000 195 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 F13BP05160 661 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 TSPAN19P0C672 248 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 NR2C1P13056 603 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 ZNF35P13682 527 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 AQP2P41181 271 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 SEC24CP53992 1094 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 RPS23P62266 143 aaKnown RBP13.11□□□□□ -0.31
PHF1-204ENST00000427826 GNGT1P63211 74 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 VLDLRP98155 873 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 TAF11Q15544 211 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 TMEM249Q2WGJ8 235 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 KRT80Q6KB66 452 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 TMEM53Q6P2H8 277 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 HACD2Q6Y1H2 254 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 CPLX4Q7Z7G2 160 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 SKA3Q8IX90 412 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 NEU4Q8WWR8 484 aaPredicted RBP13.11□□□□□ -0.31
PHF1-204ENST00000427826 CMTM5Q96DZ9 223 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 DOK1Q99704 481 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 MRPL13Q9BYD1 178 aaKnown RBP13.11□□□□□ -0.31
PHF1-204ENST00000427826 C1orf198Q9H425 327 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 C20orf141Q9NUB4 165 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 TMEM38BQ9NVV0 291 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 ZNF224Q9NZL3 707 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 A4GNTQ9UNA3 340 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 GMNCA6NCL1 334 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 A8MV72 311 aaPredicted RBP13.1□□□□□ -0.31
PHF1-204ENST00000427826 CXCR6O00574 342 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 GPRIN2O60269 458 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 LY6HO94772 140 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 PTHP01270 115 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 SERPINA5P05154 406 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 ACADSP16219 412 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 GLRXP35754 106 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 SLC7A2P52569 658 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 TRAM2Q15035 370 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 GKAP1Q5VSY0 366 aaPredicted RBP13.1□□□□□ -0.31
PHF1-204ENST00000427826 SVOPLQ8N434 492 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 ANKS4BQ8N8V4 417 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 GEMIN6Q8WXD5 167 aaKnown RBP13.1□□□□□ -0.31
PHF1-204ENST00000427826 ASB10Q8WXI3 467 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 MCHR2Q969V1 340 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 BPIFA2Q96DR5 249 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 SEPHS2Q99611 448 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 KCNN2Q9H2S1 579 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 DYNLRB1Q9NP97 96 aa13.1□□□□□ -0.31
PHF1-204ENST00000427826 TMEM129A0AVI4 362 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 ZNF682O95780 498 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 IFI30P13284 250 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 NR4A2P43354 598 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 LSM11P83369 360 aaKnown RBP eCLIP13.09□□□□□ -0.317e-8■■□□□ 12.8
PHF1-204ENST00000427826 RAB39AQ14964 217 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 CARTPTQ16568 116 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 ANKDD1AQ495B1 522 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 IFI44LQ53G44 452 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 ARMC4Q5T2S8 1044 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 C8orf82Q6P1X6 216 aaPredicted RBP13.09□□□□□ -0.31
PHF1-204ENST00000427826 FKBP9P1Q75LS8 142 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 SLC16A14Q7RTX9 510 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 VTCN1Q7Z7D3 282 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 PRIMA1Q86XR5 153 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 HIPK1Q86Z02 1210 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 CDK20Q8IZL9 346 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 RNF113BQ8IZP6 322 aaKnown RBP13.09□□□□□ -0.31
PHF1-204ENST00000427826 OFCC1Q8IZS5 231 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 SYT14Q8NB59 555 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 OR4K5Q8NGD3 323 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 MRPL24Q96A35 216 aaKnown RBP13.09□□□□□ -0.31
PHF1-204ENST00000427826 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 RNF121Q9H920 327 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 SMURF2Q9HAU4 748 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 SLC7A8Q9UHI5 535 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 HIF3AQ9Y2N7 669 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 ABCA1O95477 2261 aa13.09□□□□□ -0.31
PHF1-204ENST00000427826 VWC2LB2RUY7 222 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 NME4O00746 187 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 SYNGR3O43761 229 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 SNX3O60493 162 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 TRMUO75648 421 aaKnown RBP13.08□□□□□ -0.32
PHF1-204ENST00000427826 PATE4P0C8F1 98 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 DRD4P21917 467 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 GZMKP49863 264 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 NUDT2P50583 147 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 ZNF133P52736 654 aaPredicted RBP13.08□□□□□ -0.32
PHF1-204ENST00000427826 GYS2P54840 703 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 PLP2Q04941 152 aa13.08□□□□□ -0.32
PHF1-204ENST00000427826 RUNX1T1Q06455 604 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms