RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MYL12BO14950 172 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 LYRM1O43325 122 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CHST10O43529 356 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 KDELR3O43731 214 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 TPST2O60704 377 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 NIPSNAP2O75323 286 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CLDN11O75508 207 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 STK16O75716 305 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 NXPH2O95156 264 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 RAB36O95755 333 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CLDN1O95832 211 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MOCS2O96007 188 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 DHFRP00374 187 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PTHP01270 115 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 IFNA7P01567 189 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 IGLV3-27P01718 113 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 IFNA16P05015 189 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ATP1B1P05026 303 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 C8GP07360 202 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 STSP08842 583 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CSF3P09919 207 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 HIST1H2AGP0C0S8 130 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 TSPAN19P0C672 248 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OR56A5P0C7T3 313 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF286BP0CG31 522 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 HSMCR30P0CW71 290 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MPC1LP0DKB6 136 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SMIM10L2AP0DMW4 78 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SMIM10L2BP0DMW5 78 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SPP1P10451 314 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PSKH1P11801 424 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CTRB1P17538 263 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ADRA2CP18825 462 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SDC1P18827 310 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MYL12AP19105 171 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PTPN6P29350 595 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OR1E1P30953 314 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 FGF9P31371 208 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 CA8P35219 290 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SFTPDP35247 375 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 TGFBR1P36897 503 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 TALDO1P37837 337 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 IDH2P48735 452 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 INPP1P49441 399 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CRISP1P54107 249 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CDH4P55283 916 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 RAG2P55895 527 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 AP1S2P56377 157 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 RAB14P61106 215 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MAXP61244 160 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 RRAS2P62070 204 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 VLDLRP98155 873 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SPIBQ01892 262 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 HSF2Q03933 536 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 RGS1Q08116 209 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SMARCB1Q12824 385 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SLAMF1Q13291 335 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SGCGQ13326 291 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ILKQ13418 452 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 VGLL4Q14135 290 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 OPCMLQ14982 345 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SF3A2Q15428 464 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 SPHARQ15513 63 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF79Q15937 498 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 EXT1Q16394 746 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CARTPTQ16568 116 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 NDUFA9Q16795 377 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 UPP1Q16831 310 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 TATDN3Q17R31 274 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF630Q2M218 657 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 HLA-BQ31612 363 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 C14orf177Q52M58 125 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SPIN4Q56A73 249 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PYDC2Q56P42 97 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZRANB3Q5FWF4 1079 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CLLU1Q5K131 121 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CTSL3PQ5NE16 218 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SLC25A30Q5SVS4 291 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZC2HC1BQ5TFG8 222 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 NXNL2Q5VZ03 156 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SHEQ5VZ18 495 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 LIPJQ5W064 366 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SAXO2Q658L1 398 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PTRHD1Q6GMV3 140 aaKnown RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 CTRB2Q6GPI1 263 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 NOXRED1Q6NXP6 359 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 DOK6Q6PKX4 331 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SCIMPQ6UWF3 145 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 PET117Q6UWS5 81 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CASP12Q6UXS9 341 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 UNC5DQ6UXZ4 953 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 MACC1Q6ZN28 852 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 GRAMD2AQ8IUY3 354 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CCDC71Q8IV32 467 aaPredicted RBP2.28□□□□□ -2.04
VPS41-206ENST00000418457 TIGD4Q8IY51 512 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 ZNF683Q8IZ20 524 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SLC22A15Q8IZD6 547 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CADM2Q8N3J6 435 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 FAM89BQ8N5H3 189 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 NATD1Q8N6N6 113 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms