RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SLC6A6P31641 620 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 ELAVL2Q12926 359 aaKnown RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 COL9A2Q14055 689 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 PRRT3Q5FWE3 981 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 DHRS11Q6UWP2 260 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 ANGPTL5Q86XS5 388 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 DMRTC2Q8IXT2 367 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 ADAMTS15Q8TE58 950 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 CPNE4Q96A23 557 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 FOXRED1Q96CU9 486 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 RAB3CQ96E17 227 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 LGR4Q9BXB1 951 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 CHRDQ9H2X0 955 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 RPS10P5Q9NQ39 176 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 WDR45Q9Y484 360 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 TRAV8-7A0A075B6U6 113 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A0B4J2A0 478 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 OIP5O43482 229 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 SRPX2O60687 465 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 THBS1P07996 1170 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 CSNK2A2P19784 350 aaPredicted RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 ZBTB25P24278 435 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 ITGA3P26006 1051 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 DIO1P49895 249 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 MAP2K5Q13163 448 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 AKIRIN2Q53H80 203 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 LYG2Q86SG7 212 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC43A2Q8N370 569 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 OR4E2Q8NGC2 313 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 PRAP1Q96NZ9 151 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 MICU1Q9BPX6 476 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 SHPKQ9UHJ6 478 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 CDV3Q9UKY7 258 aaKnown RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 TBC1D3KA0A087X1G2 549 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A0A6YYC8 382 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 TRBV5-5A0A0J9YX44 114 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A1W2PR48 441 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 C9JQL5 133 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 I3L1I5 382 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 M0QYG6 137 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC31A2O15432 143 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR1F1O43749 312 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 FCGR3AP08637 254 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF735P0CB33 412 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 HIST1H1CP16403 213 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CFPP27918 469 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 PSMB6P28072 239 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SOX2P48431 317 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 DUSP8Q13202 625 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 TGIF1Q15583 401 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 NCMAPQ5T1S8 102 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF684Q5T5D7 378 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 Q6ZVU0 165 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 TRAPPC5Q8IUR0 188 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 ARRDC1Q8N5I2 433 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 KDF1Q8NAX2 398 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC16A11Q8NCK7 471 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR51D1Q8NGF3 324 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR9A2Q8NGT5 310 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR4K13Q8NH42 304 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 ADAMTS17Q8TE56 1095 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 MITD1Q8WV92 249 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 TNFRSF13CQ96RJ3 184 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 AICDAQ9GZX7 198 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 C8orf33Q9H7E9 229 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CHRNA9Q9UGM1 479 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 WIF1Q9Y5W5 379 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 EML5Q05BV3 1969 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 DUXAA6NLW8 204 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 PSMD9O00233 223 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 P2RX6O15547 441 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 FBXO24O75426 580 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 MAS1P04201 325 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CRHP06850 196 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 AQP2P41181 271 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 PPICP45877 212 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 TAS2R60P59551 318 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 HTRA3P83110 453 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 FHL1Q13642 323 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC9A5Q14940 896 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR5AR1Q8NGP9 310 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR13C8Q8NGS7 320 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNRF4Q8WWF5 429 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 DCUN1D4Q92564 292 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CDS1Q92903 461 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CCDC74AQ96AQ1 378 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SULT4A1Q9BR01 284 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 DPEP2Q9H4A9 486 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 USP36Q9P275 1121 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC27A6Q9Y2P4 619 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 ATG4BQ9Y4P1 393 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CSAG2Q9Y5P2 127 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 KPTNQ9Y664 436 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 hCG_1809904A0A1W2PP81 198 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A1W2PPH5 198 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A1W2PR64 198 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A1W2PRV1 198 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 PRR32B1ATL7 298 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 IL2RAP01589 272 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms