RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PLCL2Q9UPR0 1127 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 BTRCQ9Y297 605 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 U3KQ87 197 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MGAQ8IWI9 3026 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SNRNP200O75643 2136 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SDK2Q58EX2 2172 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 URB1O60287 2271 aaKnown RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ZFYVE26Q68DK2 2539 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 IGKV1-8A0A0C4DH67 115 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 LOC101059948A0A1B0GTJ6 334 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PNMA8CA0A1B0GUJ8 204 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 EXOC1LA0A1B0GW35 172 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 UBE2QL1A1L167 161 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 A1L4Q6 167 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 MEIOCA2RUB1 952 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 METTL15A6NJ78 407 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD30BLA7E2S9 258 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 HSPB2A8KAH6 182 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 TRIM49D1C9J1S8 452 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PHYHO14832 338 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 TOX3O15405 576 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 RGS5O15539 181 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 KCNAB3O43448 404 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CTSVO60911 334 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SCRG1O75711 98 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CYP7B1O75881 506 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SNAPC5O75971 98 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 HLA-DQA2P01906 255 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 LCKP06239 509 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CRYGCP07315 174 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 C8GP07360 202 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 DANCRP0C864 163 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SLC35E2BP0CK96 405 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 LIPCP11150 499 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 FGF5P12034 268 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 COX4I1P13073 169 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CD1DP15813 335 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ARSBP15848 533 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PAX1P15863 534 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PCMT1P22061 227 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ME2P23368 584 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 POLR2IP36954 125 aaKnown RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 GDF5P43026 501 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 GABRA4P48169 554 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SLC1A6P48664 564 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SLC7A2P52569 658 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 RAB10P61026 200 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PSME3P61289 254 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 RPL23AP62750 156 aaKnown RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ERVK-8P63133 956 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 MRPS22P82650 360 aaKnown RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 FGL1Q08830 312 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 STX4Q12846 297 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 BTN1A1Q13410 526 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 GAB1Q13480 694 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 NFYCQ13952 458 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 FLOT2Q14254 428 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 GRM7Q14831 915 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 TRAM2Q15035 370 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 HSPB2Q16082 182 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SSX2Q16385 188 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SLC5A12Q1EHB4 618 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 RNF212Q495C1 297 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PLAC9Q5JTB6 97 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CDKL4Q5MAI5 379 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SPANXN2Q5MJ10 180 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ATP1A1-AS1Q5TC04 95 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 C1orf189Q5VU69 101 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 FRMPD2BQ6IN97 320 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 LCN10Q6JVE6 187 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PWWP2BQ6NUJ5 590 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 FAM199XQ6PEV8 388 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 BHLHB9Q6PI77 547 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 FIGLAQ6QHK4 219 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 AGTRAPQ6RW13 159 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CEACAM20Q6UY09 585 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF517Q6ZMY9 492 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CYS1Q717R9 158 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CBLL1Q75N03 491 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 COMMD7Q86VX2 200 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 TPRA1Q86W33 373 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 NUDCD3Q8IVD9 361 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ENTHD1Q8IYW4 607 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PGAM4Q8N0Y7 254 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF786Q8N393 782 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 GALNT16Q8N428 558 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 D2HGDHQ8N465 521 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 C9orf62Q8N4C0 152 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 RAB42Q8N4Z0 105 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 COMMD1Q8N668 190 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 METTL27Q8N6F8 245 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF781Q8N8C0 355 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SLC38A9Q8NBW4 561 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF248Q8NDW4 579 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CHDHQ8NE62 594 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 NUDT10Q8NFP7 164 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 BPIFB6Q8NFQ5 453 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 OR9K2Q8NGE7 335 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 OR2A1Q8NGT9 310 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms