RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ABRACLQ9P1F3 81 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 NDOR1Q9UHB4 597 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 TMEM72A0PK05 275 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 DCDC2BA2VCK2 349 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 IFITM5A6NNB3 132 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 GABARAPH6UMI1 98 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 FOXE1O00358 373 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 NDUFA2O43678 99 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 TGM6O95932 706 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 THEGLP0DJG4 465 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 NQO2P16083 231 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 NT5EP21589 574 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PRKXP51817 358 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 LTBQ06643 244 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 ERV3-1Q14264 604 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 MBOAT2Q6ZWT7 520 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 NAA40Q86UY6 237 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PRSS58Q8IYP2 241 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 RGP1Q92546 391 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 NR4A3Q92570 626 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 C10orf90Q96M02 699 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 WDR92Q96MX6 357 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 HRASLS2Q9NWW9 162 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 OR5H14A6NHG9 310 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ACOT7O00154 380 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 LDB3O75112 727 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 FPR3P25089 353 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ILF3Q12906 894 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ALG11Q2TAA5 492 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 MRPL2Q5T653 305 aaKnown RBP11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF626Q68DY1 528 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 COX18Q8N8Q8 333 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 PLPP7Q8NBV4 271 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 OR2L3Q8NG85 312 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 OR4S1Q8NGB4 309 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 RASD2Q96D21 266 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ADAD1Q96M93 576 aaKnown RBP11.82□□□□□ -0.52
PTPRN-202ENST00000409251 EPHX3Q9H6B9 360 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 SYNDIG1Q9H7V2 258 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 NRIP3Q9NQ35 241 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ASH2LQ9UBL3 628 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 A0A1W2PR48 441 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF432O94892 652 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 RCBTB2O95199 551 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 HNRNPA2B1P22626 353 aaKnown RBP11.82□□□□□ -0.52
PTPRN-202ENST00000409251 MST1P26927 711 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 HTR2AP28223 471 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 PEBP1P30086 187 aaKnown RBP11.82□□□□□ -0.52
PTPRN-202ENST00000409251 CCKBRP32239 447 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 SNTB1Q13884 538 aaKnown RBP11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF658BQ4V348 819 aaPredicted RBP11.82□□□□□ -0.52
PTPRN-202ENST00000409251 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 OR1J2Q8NGS2 313 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 PHOSPHO1Q8TCT1 267 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 MS4A8Q9BY19 250 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 ISYNA1Q9NPH2 558 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 NPFFR2Q9Y5X5 522 aa11.82□□□□□ -0.52
PTPRN-202ENST00000409251 HCRTR1O43613 425 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 AIFM1O95831 613 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 GPANK1O95872 356 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 IFNGP01579 166 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 SERPINA5P05154 406 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 CD34P28906 385 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 ATP1B3P54709 279 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 MAT1AQ00266 395 aaKnown RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 DYRK1AQ13627 763 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 RASGRP3Q8IV61 690 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 JAGN1Q8N5M9 183 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 ACOT4Q8N9L9 421 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 OR10AC1Q8NH08 325 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 PPP1R1CQ8WVI7 109 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 UBL7Q96S82 380 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 SMIM3Q9BZL3 60 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 OR5V1Q9UGF6 321 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 MDC1Q14676 2089 aaKnown RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 C1orf196B1AJZ1 125 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 IGHA1P01876 353 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 THY1P04216 161 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 IL9P15248 144 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 HIST1H1CP16403 213 aaKnown RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 LSSP48449 732 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 HOXA1P49639 335 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 EFNB2P52799 333 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 RAB5BP61020 215 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 EXOSC7Q15024 291 aaKnown RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 PEA15Q15121 130 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 OR1Q1Q15612 314 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 TMEM44Q2T9K0 475 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 FAM111BQ6SJ93 734 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 LCTLQ6UWM7 567 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 FAM220AQ7Z4H9 259 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 SLC35F2Q8IXU6 374 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 PM20D2Q8IYS1 436 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 TSTD1Q8NFU3 115 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 STOML3Q8TAV4 291 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 DCUN1D4Q92564 292 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 LINC00615Q96LM1 132 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms