RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 DPCDQ9BVM2 203 aaPredicted RBP8.89□□□□□ -0.99
MSH2-202ENST00000406134 SYT4Q9H2B2 425 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 MGAT4CQ9UBM8 478 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 SPENQ96T58 3664 aaKnown RBP8.89□□□□□ -0.99
MSH2-202ENST00000406134 OR6C65A6NJZ3 312 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 ELOA3DA6NLF2 546 aaPredicted RBP8.89□□□□□ -0.99
MSH2-202ENST00000406134 PYCARD-AS1I3L0S3 204 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 NOS1APO75052 506 aaPredicted RBP8.89□□□□□ -0.99
MSH2-202ENST00000406134 TMEM127O75204 238 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 CTAG2O75638 210 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 TOXO94900 526 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 DNASE1P24855 282 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 BLVRAP53004 296 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 ELOA3BQ3SY89 546 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 PARGQ86W56 976 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 EID2Q8N6I1 236 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 SMRP1Q8NCR6 262 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 ELOA3Q8NG57 546 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 ACTR6Q9GZN1 396 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 NRSN2Q9GZP1 204 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 SLC6A5Q9Y345 797 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 HRH3Q9Y5N1 445 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 ASXL3Q9C0F0 2248 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 IGLV1-36A0A0B4J1U3 117 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 A0A1W2PR77 199 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 FRG2CA6NGY1 282 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 KDM4BO94953 1096 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 PPICP45877 212 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 LBX1P52954 281 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 ETFDHQ16134 617 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 EMC4Q5J8M3 183 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 NHLRC3Q5JS37 347 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 CLLU1Q5K131 121 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 TMEM69Q5SWH9 247 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 FAM198BQ6UWH4 519 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 ZNF440Q8IYI8 595 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 ZNF441Q8N8Z8 693 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
MSH2-202ENST00000406134 OR2T35Q8NGX2 323 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 PHOSPHO1Q8TCT1 267 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 FOXN4Q96NZ1 517 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 MESP1Q9BRJ9 268 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 UCK1Q9HA47 277 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 NKIRAS2Q9NYR9 191 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 OR10H1Q9Y4A9 318 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 ETV7Q9Y603 341 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 A0A1W2PQ72 361 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 C2CD4DB7Z1M9 353 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 DOK2O60496 412 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 HRGP04196 525 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 RAB40ALP0C0E4 278 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 POU3F2P20265 443 aaPredicted RBP8.88□□□□□ -0.99
MSH2-202ENST00000406134 IL11P20809 199 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 ITPKBP27987 946 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 EGR3Q06889 387 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 TMEM65Q6PI78 240 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 MDGA2Q7Z553 956 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 OTOSQ8NHW6 89 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 RAB40AQ8WXH6 277 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 NUDT9Q9BW91 350 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 NOX3Q9HBY0 568 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 GLTPQ9NZD2 209 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 SPEF1Q9Y4P9 236 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 H0YIG0 161 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 PDCD5O14737 125 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 XRCC3O43542 346 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 SCO1O75880 301 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 MAS1P04201 325 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 GLULP15104 373 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 IGFBP3P17936 291 aaPredicted RBP8.88□□□□□ -0.99
MSH2-202ENST00000406134 ZNF81P51508 661 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 FOXL2P58012 376 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 SNTA1Q13424 505 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 EBPQ15125 230 aaKnown RBP8.88□□□□□ -0.99
MSH2-202ENST00000406134 TCTE1Q5JU00 501 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 OR7E24Q6IFN5 339 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 KCTD20Q7Z5Y7 419 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 OR4C16Q8NGL9 310 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 FCAMRQ8WWV6 532 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 OIT3Q8WWZ8 545 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 TMEM106AQ96A25 262 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 LAT2Q9GZY6 243 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 C12orf10Q9HB07 376 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 COL6A3P12111 3177 aa8.88□□□□□ -0.99
MSH2-202ENST00000406134 LOC101059948A0A1B0GTJ6 334 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 CDC14CA4D256 554 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 H7C417 338 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 ECDO95905 644 aaPredicted RBP8.87□□□□□ -0.99
MSH2-202ENST00000406134 MAP2K6P52564 334 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 STK11Q15831 433 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 GRK1Q15835 563 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 DCAF12L2Q5VW00 463 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 OR5M10Q6IEU7 315 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 ANKRD16Q6P6B7 361 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 CDH24Q86UP0 819 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 JAZF1Q86VZ6 243 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 OR8H3Q8N146 312 aa8.87□□□□□ -0.99
MSH2-202ENST00000406134 RLN3Q8WXF3 142 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms