RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 LIPHQ8WWY8 451 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 ASB10Q8WXI3 467 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 PRRC1Q96M27 445 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 ZNF75AQ96N20 296 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 ZNF347Q96SE7 839 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 DOK1Q99704 481 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 SH3GL3Q99963 347 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 FAM107BQ9H098 131 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 RNF121Q9H920 327 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 TMEM38BQ9NVV0 291 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 ZNF224Q9NZL3 707 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 RHCGQ9UBD6 479 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 FBXO9Q9UK97 447 aaPredicted RBP11.51□□□□□ -0.57
SDF4-203ENST00000403997 A4GNTQ9UNA3 340 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 CMAHPQ9Y471 501 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 CR1P17927 2039 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 SONP18583 2426 aaKnown RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 A0A096LNT2 108 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 TMEM129A0AVI4 362 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 J3KTA2 159 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 NDUFAB1O14561 156 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 TLX2O43763 284 aaPredicted RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 PIP5K1CO60331 668 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 TRMUO75648 421 aaKnown RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 FARS2O95363 451 aaKnown RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 IFNW1P05000 195 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 ERCC1P07992 297 aaPredicted RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 IFI30P13284 250 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 ZNF35P13682 527 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 GSK3BP49841 420 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 PPOXP50336 477 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 ZNF84P51523 738 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 GALK2Q01415 458 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 LOXL1Q08397 574 aaPredicted RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 TRAM2Q15035 370 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 IFI44LQ53G44 452 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 GKAP1Q5VSY0 366 aaPredicted RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 C8orf82Q6P1X6 216 aaPredicted RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 HACD2Q6Y1H2 254 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 OR4K5Q8NGD3 323 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 GEMIN6Q8WXD5 167 aaKnown RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 MCHR2Q969V1 340 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 FAM162AQ96A26 154 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 BPIFA2Q96DR5 249 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 CMTM5Q96DZ9 223 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 FOXN4Q96NZ1 517 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 KCTD14Q9BQ13 255 aaPredicted RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 REPIN1Q9BWE0 567 aaKnown RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 DYNLRB1Q9NP97 96 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 STX18Q9P2W9 335 aaKnown RBP11.5□□□□□ -0.57
SDF4-203ENST00000403997 FBXL3Q9UKT7 428 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 SNX13Q9Y5W8 968 aa11.5□□□□□ -0.57
SDF4-203ENST00000403997 HTR3EA5X5Y0 456 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 CRLF1O75462 422 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 SERPINA1P01009 418 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 SERPINA5P05154 406 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 FUT4P22083 530 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 USF1P22415 310 aaPredicted RBP11.49□□□□□ -0.57
SDF4-203ENST00000403997 LSP1P33241 339 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 PSME3P61289 254 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.576e-7■■■■■ 27.8
SDF4-203ENST00000403997 HIST3H3Q16695 136 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 TMEM53Q6P2H8 277 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 CBLL1Q75N03 491 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 SLC16A14Q7RTX9 510 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 CPLX4Q7Z7G2 160 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 MEX3DQ86XN8 651 aaKnown RBP11.49□□□□□ -0.57
SDF4-203ENST00000403997 PRIMA1Q86XR5 153 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 ZCCHC24Q8N2G6 241 aaKnown RBP11.49□□□□□ -0.57
SDF4-203ENST00000403997 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 MRPL13Q9BYD1 178 aaKnown RBP11.49□□□□□ -0.57
SDF4-203ENST00000403997 NSRP1Q9H0G5 558 aaKnown RBP11.49□□□□□ -0.57
SDF4-203ENST00000403997 MYLK2Q9H1R3 596 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 TXNIPQ9H3M7 391 aa11.49□□□□□ -0.57
SDF4-203ENST00000403997 LOC390937A0A1W2PQ73 354 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 CENPBD1B2RD01 187 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 FFAR1O14842 300 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 ADRA2AP08913 450 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 TSPAN19P0C672 248 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 SAGP10523 405 aaPredicted RBP11.48□□□□□ -0.57
SDF4-203ENST00000403997 NCK1P16333 377 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 MAKP20794 623 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 GLRXP35754 106 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 CTXN1P60606 82 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 TOP3AQ13472 1001 aaPredicted RBP11.48□□□□□ -0.57
SDF4-203ENST00000403997 GGTLC2Q14390 218 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 SLC36A2Q495M3 483 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 ALG10Q5BKT4 473 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 ARMC4Q5T2S8 1044 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 ZNF730Q6ZMV8 503 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 OAFQ86UD1 273 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 NRMQ8IXM6 262 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 CDK20Q8IZL9 346 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 OFCC1Q8IZS5 231 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 LRRC18Q8N456 261 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms