RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CDADC1Q9BWV3 514 aa22.89■■□□□ 1.26
CPNE1-205ENST00000401607 ZNF703Q9H7S9 590 aaPredicted RBP22.89■■□□□ 1.26
CPNE1-205ENST00000401607 ACOXLQ9NUZ1 547 aa22.89■■□□□ 1.26
CPNE1-205ENST00000401607 GNG8Q9UK08 70 aa22.89■■□□□ 1.26
CPNE1-205ENST00000401607 IGKV1D-43A0A0B4J1Z2 117 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 OR5H15A6NDH6 313 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 GJE1A6NN92 205 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 H0YC42 278 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 TNFSF11O14788 317 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 HLA-DPB1P04440 258 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 RPS19P39019 145 aaKnown RBP22.89■■□□□ 1.25
CPNE1-205ENST00000401607 CENPAP49450 140 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 BLVRAP53004 296 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 CLDN20P56880 219 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 CLN3Q13286 438 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 INSL4Q14641 139 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 OTPQ5XKR4 325 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 DMKNQ6E0U4 476 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-205ENST00000401607 DPY19L4Q7Z388 723 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 GGNQ86UU5 652 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 MRPL48Q96GC5 212 aaKnown RBP22.89■■□□□ 1.25
CPNE1-205ENST00000401607 ADAD1Q96M93 576 aaKnown RBP22.89■■□□□ 1.25
CPNE1-205ENST00000401607 SFXN2Q96NB2 322 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 MNTQ99583 582 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 HDHD5Q9BXW7 423 aa22.89■■□□□ 1.25
CPNE1-205ENST00000401607 MRPL13Q9BYD1 178 aaKnown RBP22.89■■□□□ 1.25
CPNE1-205ENST00000401607 NXF2Q9GZY0 626 aaKnown RBP22.89■■□□□ 1.25
CPNE1-205ENST00000401607 COA3Q9Y2R0 106 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-205ENST00000401607 RIF1Q5UIP0 2472 aaKnown RBP22.88■■□□□ 1.25
CPNE1-205ENST00000401607 PSMD9O00233 223 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 GABRPO00591 440 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 CDK2AP1O14519 115 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 ALOX5APP20292 161 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 PTGS2P35354 604 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 CSNK2A1P68400 391 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-205ENST00000401607 ZNF404Q494X3 552 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 TMEM91Q6ZNR0 172 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 MCFD2Q8NI22 146 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 PGLYRP3Q96LB9 341 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 COQ7Q99807 217 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 RASD1Q9Y272 281 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 FREM3P0C091 2139 aa22.88■■□□□ 1.25
CPNE1-205ENST00000401607 CNOT1A5YKK6 2376 aaKnown RBP22.87■■□□□ 1.25
CPNE1-205ENST00000401607 OGG1O15527 345 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 EIF1BO60739 113 aaKnown RBP22.87■■□□□ 1.25
CPNE1-205ENST00000401607 HLA-DQA2P01906 255 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 CD53P19397 219 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 RFC3P40938 356 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 OPRL1P41146 370 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 GBX2P52951 348 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-205ENST00000401607 MFAP5Q13361 173 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 DYNC1I2Q13409 638 aaKnown RBP22.87■■□□□ 1.25
CPNE1-205ENST00000401607 LINC00299Q6ZSB3 139 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 OR6Q1Q8NGQ2 317 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 KCTD7Q96MP8 289 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 SRXN1Q9BYN0 137 aa22.87■■□□□ 1.25
CPNE1-205ENST00000401607 ZNF552Q9H707 407 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-205ENST00000401607 NME2P1O60361 137 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 SP1P08047 785 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 ZNF43P17038 809 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 NME2P22392 152 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 CD97P48960 835 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 BMXP51813 675 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 GFRA1P56159 465 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 SLC3A1Q07837 685 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 SLC25A25Q6KCM7 469 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 DNM1P34Q6PK57 102 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 OTOSQ8NHW6 89 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 UCN2Q96RP3 112 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 SIAEQ9HAT2 523 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 MRM2Q9UI43 246 aaKnown RBP22.86■■□□□ 1.25
CPNE1-205ENST00000401607 KCNG2Q9UJ96 466 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 LAMP5Q9UJQ1 280 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 ING1Q9UK53 422 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-205ENST00000401607 IGHV3-15A0A0B4J1V0 119 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 SLC35F4A4IF30 521 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 CD8B2A6NJW9 211 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 DVL2O14641 736 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 PGA4P0DJD7 388 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 PGA3P0DJD8 388 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 CD8BP10966 210 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 GALP22466 123 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 GLO1Q04760 184 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 CDK5R1Q15078 307 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 OR6X1Q8NH79 312 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 RNF166Q96A37 237 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-205ENST00000401607 MFRPQ9BY79 579 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 TTTY12Q9BZ98 90 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 RNF32Q9H0A6 362 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 SLC24A3Q9HC58 644 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 CDV3Q9UKY7 258 aaKnown RBP22.86■■□□□ 1.25
CPNE1-205ENST00000401607 GSTK1Q9Y2Q3 226 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 A3GALT2U3KPV4 340 aa22.86■■□□□ 1.25
CPNE1-205ENST00000401607 ZNF593O00488 134 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-205ENST00000401607 RGS9O75916 674 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-205ENST00000401607 CDRT1O95170 752 aa22.85■■□□□ 1.25
CPNE1-205ENST00000401607 ABHD16AO95870 558 aa22.85■■□□□ 1.25
CPNE1-205ENST00000401607 HPNP05981 417 aa22.85■■□□□ 1.25
CPNE1-205ENST00000401607 OR8G3PP0DMU2 310 aa22.85■■□□□ 1.25
CPNE1-205ENST00000401607 PSMB10P40306 273 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms