RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 POMGNT2Q8NAT1 580 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 OR6N1Q8NGY5 312 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 MCHR2Q969V1 340 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 NMNAT3Q96T66 252 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 RBM24Q9BX46 236 aaKnown RBP14.04□□□□□ -0.16
HMGA1-204ENST00000401473 GALNT8Q9NY28 637 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 UPB1Q9UBR1 384 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 LRBAP50851 2863 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 ABCA4P78363 2273 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 TACC2O95359 2948 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 CADP27708 2225 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 SLC22A23A1A5C7 686 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 PRSS37A4D1T9 235 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 CLDN1O95832 211 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 ITGA5P08648 1049 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 QDPRP09417 244 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 CSNK1A1P48729 337 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 CLRN1P58418 232 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 FMODQ06828 376 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 KRR1Q13601 381 aaKnown RBP14.04□□□□□ -0.16
HMGA1-204ENST00000401473 PGGHGQ32M88 737 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 FBXL19-AS1Q494R0 122 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 STAC2Q6ZMT1 411 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 NPEPL1Q8NDH3 523 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 OR52E2Q8NGJ4 325 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 TSSK2Q96PF2 358 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 GABARAPL3Q9BY60 117 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 NDEL1Q9GZM8 345 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 ASH1LQ9NR48 2969 aaKnown RBP14.03□□□□□ -0.16
HMGA1-204ENST00000401473 A1L4Q6 167 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 OR6C68A6NDL8 312 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 OR6C65A6NJZ3 312 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 ZAR1LA6NP61 321 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 E9PQ18 207 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 RPL36A-HNRNPH2H7BZ11 118 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 DCTN6O00399 190 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 ASCL1P50553 236 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 ROR2Q01974 943 aaKnown RBP14.03□□□□□ -0.16
HMGA1-204ENST00000401473 CD47Q08722 323 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 ETFDHQ16134 617 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 FBXW10Q5XX13 1052 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 C22orf34Q6ZV56 151 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 CXorf67Q86X51 503 aaPredicted RBP14.03□□□□□ -0.16
HMGA1-204ENST00000401473 GPR137CQ8N3F9 429 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 CYB561A3Q8NBI2 242 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 SDR9C7Q8NEX9 313 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 NOXO1Q8NFA2 376 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 PSMG3-AS1Q96PY0 264 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 MBOAT4Q96T53 435 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 GRIP2Q9C0E4 1043 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 SYT4Q9H2B2 425 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 TOR3AQ9H497 397 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 RIBC2Q9H4K1 309 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 GPR35Q9HC97 309 aa14.03□□□□□ -0.16
HMGA1-204ENST00000401473 A6NIZ1 184 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 CENPBD1B2RD01 187 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 XKRYO14609 159 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 LYZL6O75951 148 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 KRT33AO76009 404 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 CDH2P19022 906 aaPredicted RBP14.02□□□□□ -0.16
HMGA1-204ENST00000401473 COX5AP20674 150 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 RAP1BP61224 184 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 RAP1AP62834 184 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 ITGADQ13349 1161 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 SNTB1Q13884 538 aaKnown RBP14.02□□□□□ -0.16
HMGA1-204ENST00000401473 CEACAM16Q2WEN9 425 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 FAM205BPQ63HN1 556 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 LEG1Q6P5S2 330 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 ZNF433Q8N7K0 673 aaPredicted RBP14.02□□□□□ -0.16
HMGA1-204ENST00000401473 SLC25A19Q9HC21 320 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 NPDC1Q9NQX5 325 aaPredicted RBP14.02□□□□□ -0.16
HMGA1-204ENST00000401473 VSX1Q9NZR4 365 aaPredicted RBP14.02□□□□□ -0.16
HMGA1-204ENST00000401473 BAIAP2Q9UQB8 552 aa14.02□□□□□ -0.16
HMGA1-204ENST00000401473 ROS1P08922 2347 aa14.02□□□□□ -0.17
HMGA1-204ENST00000401473 C19orf84I3L1E1 186 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 SURF4O15260 269 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 ZNF133P52736 654 aaPredicted RBP14.01□□□□□ -0.17
HMGA1-204ENST00000401473 RAD23AP54725 363 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 EFNB1P98172 346 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.01□□□□□ -0.17
HMGA1-204ENST00000401473 P2RY6Q15077 328 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 THEM4Q5T1C6 240 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 SFRP5Q5T4F7 317 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 HDDC2Q7Z4H3 204 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 OR6V1Q8N148 313 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 PTP4A1Q93096 173 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 ULBP2Q9BZM5 246 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 NUAK2Q9H093 628 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 CMC2Q9NRP2 79 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 ZNF587BE7ETH6 402 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 CTLA4P16410 223 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 MPGP29372 298 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 CCKARP32238 428 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 CD79BP40259 229 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 PTDSS1P48651 473 aaKnown RBP14.01□□□□□ -0.17
HMGA1-204ENST00000401473 CRMP1Q14194 572 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 SLX4IPQ5VYV7 408 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 SLC25A47Q6Q0C1 308 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 ADCK1Q86TW2 530 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 SLC37A3Q8NCC5 494 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms