RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 WDR88Q6ZMY6 472 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 GIMAP1Q8WWP7 306 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 RSPRY1Q96DX4 576 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 ARSGQ96EG1 525 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR2A5Q96R48 311 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 ARHGDIGQ99819 225 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 NICN1Q9BSH3 213 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 LIN7BQ9HAP6 207 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 CHST11Q9NPF2 352 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 STEAP1Q9UHE8 339 aa13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.33
PCDHGA11-201ENST00000398587 ICOSLGO75144 302 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 RAF1P04049 648 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 RPL18Q07020 188 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 ACTBL2Q562R1 376 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 CPEB2Q7Z5Q1 589 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 SULF2Q8IWU5 870 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 CNEP1R1Q8N9A8 125 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 GJC3Q8NFK1 279 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 FNDC9Q8TBE3 224 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 FAM3DQ96BQ1 224 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 TSNAXQ99598 290 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 GON7Q9BXV9 100 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 SLCO5A1Q9H2Y9 848 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 ACOXLQ9NUZ1 547 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 NPAP1Q9NZP6 1156 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 MRPS28Q9Y2Q9 187 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 FRG2CA6NGY1 282 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 VEGFCP49767 419 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 STK11Q15831 433 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 KIRREL2Q6UWL6 708 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 AMER3Q8N944 861 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 MOSPD3O75425 235 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 NKX2-2O95096 273 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 COL9A1P20849 921 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 ETV6P41212 452 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 TAS2R46P59540 309 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 GPBAR1Q8TDU6 330 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 DCUN1D4Q92564 292 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 RAB3CQ96E17 227 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZC3H10Q96K80 434 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 RHNO1Q9BSD3 238 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 GPATCH2Q9NW75 528 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 SIRT5Q9NXA8 310 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNFX1Q9P2E3 1918 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 WISP3O95389 354 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 TCRBP04435 133 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 HSF1Q00613 529 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 GLYATL3Q5SZD4 288 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 LINC00696Q6ZRV3 163 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 TRAPPC6BQ86SZ2 158 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 KIF18BQ86Y91 864 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 RANGRFQ9HD47 186 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF346Q9UL40 294 aaKnown RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 GPR55Q9Y2T6 319 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 ATG2BQ96BY7 2078 aa13.01□□□□□ -0.33
PCDHGA11-201ENST00000398587 TMEM82A0PJX8 343 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 PIAS2O75928 621 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 APOC3P02656 99 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 LIPCP11150 499 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 FCGR2AP12318 317 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 DLSTP36957 453 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 SEC61A1P61619 476 aaKnown RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 RRAS2P62070 204 aaPredicted RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 SLC36A2Q495M3 483 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 PGAP1Q75T13 922 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 SIAH3Q8IW03 269 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF695Q8IW36 515 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 CELF2-AS1Q8N7Q2 184 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 BBS1Q8NFJ9 593 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 FGGYQ96C11 551 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 DCBLD2Q96PD2 775 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 CMSS1Q9BQ75 279 aaKnown RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 YARS2Q9Y2Z4 477 aaKnown RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 B3GALT1Q9Y5Z6 326 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 TRAPPC2LH3BP13 241 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 CNOT4O95628 575 aaKnown RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 SERPINE2P07093 398 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF44P15621 663 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 EVI2BP34910 448 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 TNK1Q13470 666 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 FZD2Q14332 565 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 NPSR1Q6W5P4 371 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 CD300LFQ8TDQ1 290 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 PAPOLGQ9BWT3 736 aaKnown RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 EHFQ9NZC4 300 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 CCL27Q9Y4X3 112 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 SCN4AP35499 1836 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 A0A0A6YYH2 397 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 LOC100289279A0A1B0GTE1 492 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 TRABD2BA6NFA1 517 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 A6NJ64 397 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 NPIPB8E9PQR5 432 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF254O75437 659 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ITGB2P05107 769 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms