RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TRIOBPQ9H2D6 2365 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 A0A0B4J2A0 478 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 TRBV2A0A0J9YWF9 115 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 OR6C68A6NDL8 312 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 TP53I11O14683 189 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 HSPA12AO43301 675 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 MED6O75586 246 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 RPP14O95059 124 aaKnown RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 AMY2AP04746 511 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SDHAP31040 664 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SLC6A6P31641 620 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SELENOPP49908 381 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 EPHA4P54764 986 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 RBMS2Q15434 407 aaKnown RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.22□□□□□ -1.57
RFFL-202ENST00000394597 ZNF628Q5EBL2 1059 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 TPRA1Q86W33 373 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 ATCAYQ86WG3 371 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 TMPRSS12Q86WS5 348 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 MEX3DQ86XN8 651 aaKnown RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 ARL6IP6Q8N6S5 226 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 UBAC2Q8NBM4 344 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 STEAP2Q8NFT2 490 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 OR4K17Q8NGC6 315 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 THAP3Q8WTV1 239 aaPredicted RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 TMEM234Q8WY98 164 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SLAMF9Q96A28 289 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 CCDC74AQ96AQ1 378 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 CMKLR1Q99788 373 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 ATF6BQ99941 703 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 TMEM121BQ9BXQ6 578 aaPredicted RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 TUBG2Q9NRH3 451 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SHPKQ9UHJ6 478 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 PCOLCE2Q9UKZ9 415 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 PCDHB10Q9UN67 800 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 WASF3Q9UPY6 502 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 A0A0A6YYD5 115 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 TRBV4-1A0A0J9YWV2 114 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 UNC119BA6NIH7 251 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 NPIPB8E9PQR5 432 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 BRINP1O60477 761 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 RAD1O60671 282 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 PRAMEF4O60810 478 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 SCRG1O75711 98 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 EIF4EP06730 217 aaKnown RBP5.21□□□□□ -1.57
RFFL-202ENST00000394597 LIPCP11150 499 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 GABRA1P14867 456 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 MGMTP16455 207 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 RAB4AP20338 218 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 PAX6P26367 422 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 GPR3P46089 330 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 HSD17B7P56937 341 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 NXPH1P58417 271 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 DCAF7P61962 342 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 RPS15P62841 145 aaKnown RBP5.21□□□□□ -1.57
RFFL-202ENST00000394597 MRPS10P82664 201 aaKnown RBP5.21□□□□□ -1.57
RFFL-202ENST00000394597 MAP4K2Q12851 820 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 ILKQ13418 452 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 GSG1Q2KHT4 349 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 MPEG1Q2M385 716 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 ACTBL2Q562R1 376 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 PRAMEF9Q5VWM5 478 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 TFAP2EQ6VUC0 442 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 ZNF227Q86WZ6 799 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 VRK2Q86Y07 508 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 CPOQ8IVL8 374 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 ZNF676Q8N7Q3 588 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 OR2T33Q8NG76 320 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 GLYATL2Q8WU03 294 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 FBXO17Q96EF6 278 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 PRRC1Q96M27 445 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 OR6C1Q96RD1 312 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 ADAT1Q9BUB4 502 aaKnown RBP5.21□□□□□ -1.57
RFFL-202ENST00000394597 RSRP1Q9BUV0 290 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 PBDC1Q9BVG4 233 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 POLDIP3Q9BY77 421 aaKnown RBP5.21□□□□□ -1.57
RFFL-202ENST00000394597 B3GAT2Q9NPZ5 323 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 DHCR7Q9UBM7 475 aaKnown RBP5.21□□□□□ -1.57
RFFL-202ENST00000394597 CBLCQ9ULV8 474 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 CAMK2AQ9UQM7 478 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 MMACHCQ9Y4U1 282 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 FRMPD3Q5JV73 1810 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 DOCK4Q8N1I0 1966 aa5.21□□□□□ -1.57
RFFL-202ENST00000394597 TSC2P49815 1807 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 A0A0B4J293 547 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 MEIS3P1A6NDR6 274 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 ZNF705FA8MVS1 300 aaPredicted RBP5.21□□□□□ -1.58
RFFL-202ENST00000394597 EIF1AYO14602 144 aaKnown RBP5.21□□□□□ -1.58
RFFL-202ENST00000394597 ABCD4O14678 606 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 TBX19O60806 448 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 NSA2O95478 260 aaKnown RBP5.21□□□□□ -1.58
RFFL-202ENST00000394597 RENP00797 406 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 IGHV4-34P06331 123 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 ZNF705DP0CH99 300 aaPredicted RBP5.21□□□□□ -1.58
RFFL-202ENST00000394597 ZNF705BP0CI00 300 aaPredicted RBP5.21□□□□□ -1.58
RFFL-202ENST00000394597 PGCP20142 388 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 POU3F2P20265 443 aaPredicted RBP5.21□□□□□ -1.58
RFFL-202ENST00000394597 CD1CP29017 333 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 CD80P33681 288 aa5.21□□□□□ -1.58
RFFL-202ENST00000394597 CASRP41180 1078 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms