RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 Q0VFX4 171 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 FAM27D1Q5T7N8 215 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 DHRS13Q6UX07 377 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 OR5M1Q8NGP8 315 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 OR5B2Q96R09 309 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 SACM1LQ9NTJ5 587 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 ZNF281Q9Y2X9 895 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 PSMD9O00233 223 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 UPK3AO75631 287 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 DPP4P27487 766 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 RPS11P62280 158 aaKnown RBP eCLIP22.6■■□□□ 1.21
SHOX2-201ENST00000389589 C11orf91Q3C1V1 193 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 YIF1BQ5BJH7 314 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 LIPNQ5VXI9 398 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 OR13C5Q8NGS8 318 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 THEM6Q8WUY1 208 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 TMEM41AQ96HV5 264 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 KCNK17Q96T54 332 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 TTYH2Q9BSA4 534 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 TSPAN10Q9H1Z9 355 aaPredicted RBP22.6■■□□□ 1.21
SHOX2-201ENST00000389589 ADAM30Q9UKF2 790 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 IKZF2Q9UKS7 526 aa22.6■■□□□ 1.21
SHOX2-201ENST00000389589 FABP12A6NFH5 140 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 ZNF593O00488 134 aaPredicted RBP22.59■■□□□ 1.21
SHOX2-201ENST00000389589 GPANK1O95872 356 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 UCHL1P09936 223 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 OR2B6P58173 313 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 DEFA1P59665 94 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 DEFA3P59666 94 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 HES3Q5TGS1 186 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 XKRXQ6PP77 449 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 FAM131AQ6UXB0 335 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 UNQ9370/PRO34162Q6UXP9 181 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 SLC22A16Q86VW1 577 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 RNF166Q96A37 237 aaPredicted RBP22.59■■□□□ 1.21
SHOX2-201ENST00000389589 KIAA1143Q96AT1 154 aaPredicted RBP22.59■■□□□ 1.21
SHOX2-201ENST00000389589 PDCD1LG2Q9BQ51 273 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 SP140LQ9H930 580 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 MASP2O00187 686 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 ZNF239Q16600 458 aaKnown RBP22.59■■□□□ 1.21
SHOX2-201ENST00000389589 TIGD3Q6B0B8 471 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 MFRPQ9BY79 579 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 SRRQ9GZT4 340 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 TMEM185BQ9H7F4 350 aa22.59■■□□□ 1.21
SHOX2-201ENST00000389589 PCNX2A6NKB5 2137 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 FREM3P0C091 2139 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 DLSTP36957 453 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 NANOS3P60323 173 aaKnown RBP22.58■■□□□ 1.21
SHOX2-201ENST00000389589 FOXK1P85037 733 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 ALKBH1Q13686 389 aaKnown RBP22.58■■□□□ 1.21
SHOX2-201ENST00000389589 ZNF79Q15937 498 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 SLC18B1Q6NT16 456 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 METAP1DQ6UB28 335 aaPredicted RBP22.58■■□□□ 1.21
SHOX2-201ENST00000389589 NR2C2APQ86WQ0 139 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 MRPL22Q9NWU5 206 aaKnown RBP22.58■■□□□ 1.21
SHOX2-201ENST00000389589 KCNG2Q9UJ96 466 aa22.58■■□□□ 1.21
SHOX2-201ENST00000389589 ZNF879B4DU55 563 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 SLC19A2O60779 497 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 CBR3O75828 277 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 RPP14O95059 124 aaKnown RBP22.58■■□□□ 1.2
SHOX2-201ENST00000389589 TMEM176BQ3YBM2 270 aaPredicted RBP22.58■■□□□ 1.2
SHOX2-201ENST00000389589 IDNKQ5T6J7 187 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 UEVLDQ8IX04 471 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 ZNF454Q8N9F8 522 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 POC5Q8NA72 575 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 B3GAT1Q9P2W7 334 aa22.58■■□□□ 1.2
SHOX2-201ENST00000389589 P04436 131 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 RAB3BP20337 219 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 ADAM8P78325 824 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 SLC35A1P78382 337 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 ETFDHQ16134 617 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 CSRP2Q16527 193 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 ZNF468Q5VIY5 522 aaPredicted RBP22.57■■□□□ 1.2
SHOX2-201ENST00000389589 SFXN4Q6P4A7 337 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 HDDC2Q7Z4H3 204 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 RAB43Q86YS6 212 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 OR8H2Q8N162 312 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 GDPD1Q8N9F7 314 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 GNRHR2Q96P88 292 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 MED29Q9NX70 200 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 DKKL1Q9UK85 242 aa22.57■■□□□ 1.2
SHOX2-201ENST00000389589 COA3Q9Y2R0 106 aaPredicted RBP22.57■■□□□ 1.2
SHOX2-201ENST00000389589 A0A1W2PNR3 127 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 HPGDSO60760 199 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 ZFPL1O95159 310 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 PTTG1O95997 202 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 ZNF17P17021 662 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 PTBP1P26599 531 aaKnown RBP eCLIP22.56■■□□□ 1.25e-6■■■■□ 24.3
SHOX2-201ENST00000389589 PTGS2P35354 604 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 PSMD7P51665 324 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 C19orf57Q0VDD7 668 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 TRIP6Q15654 476 aaKnown RBP22.56■■□□□ 1.2
SHOX2-201ENST00000389589 ACER2Q5QJU3 275 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 ZNF318Q5VUA4 2279 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 NHLRC1Q6VVB1 395 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 MIB2Q96AX9 1013 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 TXNDC15Q96J42 360 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 OR14A2Q96R54 314 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 OR8B4Q96RC9 309 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 POLE4Q9NR33 117 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms