RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 NRXN2Q9P2S2 1712 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 LILRB5O75023 590 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 GCH1P30793 250 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 CD79BP40259 229 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 RRADP55042 308 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 CLDN17P56750 224 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 BATFQ16520 125 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 UBE2NLQ5JXB2 153 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 C8orf82Q6P1X6 216 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF707Q96C28 371 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 ELF4Q99607 663 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 NICN1Q9BSH3 213 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 RPP25Q9BUL9 199 aaKnown RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 CRISPLD2Q9H0B8 497 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 GALNT9Q9HCQ5 603 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF705GA8MUZ8 300 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 FABP7O15540 132 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 THBS1P07996 1170 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 GABRG2P18507 467 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 RAE1P78406 368 aaKnown RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 ARHGAP11BQ3KRB8 267 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 RPS19BP1Q86WX3 136 aaKnown RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 UBALD2Q8IYN6 164 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 LGALS14Q8TCE9 139 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 FER1L6-AS2Q96M78 137 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 HRH4Q9H3N8 390 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 IDSB3KWA1 339 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 NUDT21O43809 227 aaKnown RBP13.79□□□□□ -0.2
NPHP4-201ENST00000378156 ANKRD53Q8N9V6 530 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 RHBDD3Q9Y3P4 386 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 B3GALT1Q9Y5Z6 326 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 SPTY2D1-AS1A0A0U1RR47 76 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 ANKRD30BLA7E2S9 258 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 TNFRSF10AO00220 468 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 EIF4E2O60573 245 aaKnown RBP13.79□□□□□ -0.2
NPHP4-201ENST00000378156 SERPINE2P07093 398 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 CISD3P0C7P0 127 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 PTBP1P26599 531 aaKnown RBP eCLIP13.79□□□□□ -0.2
NPHP4-201ENST00000378156 MLC1Q15049 377 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 Q6ZS52 159 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 IL17RDQ8NFM7 739 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 CAMK2AQ9UQM7 478 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 TRIM64BA6NI03 449 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 GPR137BO60478 399 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 UBL3O95164 117 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 RAC2P15153 192 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 RPL23AP62750 156 aaKnown RBP13.79□□□□□ -0.2
NPHP4-201ENST00000378156 TEKQ02763 1124 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 VWA2Q5GFL6 755 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 ALKAL2Q6UX46 152 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 LINC00696Q6ZRV3 163 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 SLC16A14Q7RTX9 510 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 CAMKMTQ7Z624 323 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF511Q8NB15 262 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 ZFAND1Q8TCF1 268 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 NDUFB11Q9NX14 153 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 SLC22A23A1A5C7 686 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 SCGB2A1O75556 95 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 HLA-AP01891 365 aaKnown RBP13.79□□□□□ -0.2
NPHP4-201ENST00000378156 AVPI1Q5T686 147 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 OR4M1Q8NGD0 313 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 MRGPRX3Q96LB0 322 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 NPFFR2Q9Y5X5 522 aa13.79□□□□□ -0.2
NPHP4-201ENST00000378156 METTL12A8MUP2 240 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 DPM1O60762 260 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 ALX3O95076 343 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 GDNFP39905 211 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 CX3CR1P49238 355 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 BIDP55957 195 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SORDQ00796 357 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 CNN3Q15417 329 aaKnown RBP13.78□□□□□ -0.2
NPHP4-201ENST00000378156 TMEM215Q68D42 235 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SYT13Q7L8C5 426 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 FAM122BQ7Z309 247 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SLC51BQ86UW2 128 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 GRAMD2AQ8IUY3 354 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SULF2Q8IWU5 870 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 STT3BQ8TCJ2 826 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
NPHP4-201ENST00000378156 BTF3L4Q96K17 158 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 PRAMEF25A6NGN4 478 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 DVL2O14641 736 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SHOXO15266 292 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 EIF1BO60739 113 aaKnown RBP13.78□□□□□ -0.2
NPHP4-201ENST00000378156 LALBAP00709 142 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 MSX1P28360 303 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 EXT1Q16394 746 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 C9orf135Q5VTT2 229 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SLC43A2Q8N370 569 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 OR10K1Q8NGX5 313 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 CSF3RQ99062 836 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SMLR1H3BR10 107 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 UPK1AO00322 258 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 HTD2P86397 168 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 LTBQ06643 244 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 EIF4EBP2Q13542 120 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-201ENST00000378156 LCN10Q6JVE6 187 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF620Q6ZNG0 422 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 NDUFAF7Q7L592 441 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms