RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 GPN3Q9UHW5 284 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 A0A0D9SG52 128 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 TRBV2A0A0J9YWF9 115 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 KANTRA0A1W2PQU2 76 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 PRICKLE3O43900 615 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 GYPBP06028 91 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 ACAA1P09110 424 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 CDK2P24941 298 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 NTSP30990 170 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 FAUP35544 74 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 LUMP51884 338 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 FOXK2Q01167 660 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 CDK5R1Q15078 307 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 MPPED2Q15777 294 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 AVPI1Q5T686 147 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 RFLNBQ8N5W9 214 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 AMER3Q8N944 861 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 CYB561A3Q8NBI2 242 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 OR2A1Q8NGT9 310 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 STK35Q8TDR2 534 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 WNT2BQ93097 391 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 PEX11GQ96HA9 241 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 HS6ST2Q96MM7 605 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 NOX4Q9NPH5 578 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 SLC22A11Q9NSA0 550 aa13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 PTPRZ1P23471 2315 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-201ENST00000376266 IGHV1OR21-1A0A087WYE8 117 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 FEZF1A0PJY2 475 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 OGG1O15527 345 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 SSX5O60225 188 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 CRYBA1P05813 215 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 S100A9P06702 114 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 GPR3P46089 330 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 FXYD6P3P58550 94 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 ACTC1P68032 377 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 ACTA1P68133 377 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 ZNF704Q6ZNC4 412 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 USP53Q70EK8 1073 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 SLC16A13Q7RTY0 426 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 OR2W3Q7Z3T1 314 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 LNX2Q8N448 690 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 IFI44Q8TCB0 444 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 PDCD1LG2Q9BQ51 273 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 CCDC3Q9BQI4 270 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 LHX9Q9NQ69 397 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 GSN-AS1Q9NRJ2 163 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 CMC2Q9NRP2 79 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 SIDT1Q9NXL6 827 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 FBXL4Q9UKA2 621 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 MOKQ9UQ07 419 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 FAM221BA6H8Z2 402 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 PRKRAO75569 313 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 RPS11P62280 158 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 SIRPAP78324 504 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 PCGF3Q3KNV8 242 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 C4orf46Q504U0 113 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 DHRS7BQ6IAN0 325 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 OOSP2Q86WS3 158 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 ARMC10Q8N2F6 343 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 OR6S1Q8NH40 331 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 MYEF2Q9P2K5 600 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 MBD2Q9UBB5 411 aa13.68□□□□□ -0.22
CCHCR1-201ENST00000376266 UNC13CQ8NB66 2214 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 TMEM272A0A1B0GTI8 110 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 RIIAD1A6NNX1 92 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 RAB40ALP0C0E4 278 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 EDNRAP25101 427 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 AGTR1P30556 359 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 CAPZBP47756 277 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 RPS15P62841 145 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PRR5P85299 388 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PAN3Q58A45 887 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PGAP1Q75T13 922 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 OR1S2Q8NGQ3 325 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 FLVCR1-AS1Q8TAF5 88 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 RAB40AQ8WXH6 277 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 NAT6Q93015 286 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PELI1Q96FA3 418 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 ZNF75AQ96N20 296 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 OR7D2Q96RA2 312 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 GFI1Q99684 422 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 ZNF471Q9BX82 626 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 WDR13Q9H1Z4 485 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 ANKRD10Q9NXR5 420 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PCDHB10Q9UN67 800 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 OR14I1A6ND48 311 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 SYNDIG1LA6NDD5 238 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 MAKP20794 623 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 CD1CP29017 333 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 DUSP3P51452 185 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 NR0B1P51843 470 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 TAS2R20P59543 309 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PPIAP62937 165 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 BLOC1S1P78537 153 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 COL9A2Q14055 689 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PRAMEF8Q5VWM4 474 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 PRAMEF7Q5VXH5 474 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 ARMC6Q6NXE6 501 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 LCTLQ6UWM7 567 aa13.67□□□□□ -0.22
CCHCR1-201ENST00000376266 TMPRSS9Q7Z410 1059 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms