RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ATG12O94817 140 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 NAGAP17050 411 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 NME2P22392 152 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 FGF9P31371 208 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 RPS10P46783 165 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 EFNA3P52797 238 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 PAPD4Q6PIY7 484 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 FBXO46Q6PJ61 603 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 FBXW12Q6X9E4 464 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 CMTM4Q8IZR5 234 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 OR2A1Q8NGT9 310 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 ATP6V1G2-DDX39BF2Z307 99 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 CHATP28329 748 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 MRPS21P82921 87 aaKnown RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 LIX1LQ8IVB5 337 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 PHOSPHO2Q8TCD6 241 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 SPPL3Q8TCT6 385 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 RSPRY1Q96DX4 576 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 WSB2Q9NYS7 404 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 DHCR7Q9UBM7 475 aaKnown RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 A4GNTQ9UNA3 340 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 FLVCR2Q9UPI3 526 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 TMEM200CA6NKL6 621 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 A8MVM7 634 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 OR7C1O76099 320 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 IFNA4P05014 189 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 VEGFBP49765 207 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 TMEM176BQ3YBM2 270 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 C8orf82Q6P1X6 216 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 SLC22A25Q6T423 547 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 WDFY2Q96P53 400 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 SEMA6CQ9H3T2 930 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 HRASLSQ9HDD0 168 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 C1orf123Q9NWV4 160 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 OR52A1Q9UKL2 312 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 IGLV3-16A0A075B6K0 115 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 OTX2P32243 289 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 EEF1A1P68104 462 aaKnown RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 SSX1Q16384 188 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 FCRL6Q6DN72 434 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 PGAP1Q75T13 922 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 EID2BQ96D98 161 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 HHIPQ96QV1 700 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 ATF6BQ99941 703 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 HINT2Q9BX68 163 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 SLC25A31Q9H0C2 315 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 PRMT8Q9NR22 394 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 TRBV11-1A0A0K0K1C0 115 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 HRO43593 1189 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 LPLP06858 475 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 RAC2P15153 192 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 TNFRSF4P43489 277 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 ATP1B3P54709 279 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 MTCP1P56278 107 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 SRYQ05066 204 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 IAH1Q2TAA2 248 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-203ENST00000375274 MDGA2Q7Z553 956 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 PRR18Q8N4B5 295 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 OR56B2PQ8NGI1 322 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 LRFN5Q96NI6 719 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 DCBLD2Q96PD2 775 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 PIGMQ9H3S5 423 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 LMAN1LQ9HAT1 526 aa10.59□□□□□ -0.71
PTCH1-203ENST00000375274 CD300LBA8K4G0 201 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 CCSO14618 274 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 TK1P04183 234 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 RAD52P43351 418 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 HMGA2P52926 109 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 BIDP55957 195 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 RPL23AP62750 156 aaKnown RBP10.58□□□□□ -0.72
PTCH1-203ENST00000375274 RPS15P62841 145 aaKnown RBP10.58□□□□□ -0.72
PTCH1-203ENST00000375274 FAAP20Q6NZ36 180 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 RHOUQ7L0Q8 258 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 SLC37A2Q8TED4 501 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 STRADBQ9C0K7 418 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 NRSN2Q9GZP1 204 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 CYSLTR2Q9NS75 346 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 WDPCPO95876 746 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 FCGR2AP12318 317 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 CRYBB2P43320 205 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 HSD17B7P56937 341 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 C17orf67Q0P5P2 114 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 MKXQ8IYA7 352 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 ANKRD53Q8N9V6 530 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 ST8SIA4Q92187 359 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 LINC00615Q96LM1 132 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-203ENST00000375274 METTL9Q9H1A3 318 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 TCEAL2Q9H3H9 227 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-203ENST00000375274 ZNF286AQ9HBT8 521 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 IL20Q9NYY1 176 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 LOC102725191A0A1B0GVB3 256 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 VSTM5A8MXK1 200 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 TNFSF12O43508 249 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 EPXP11678 715 aa10.58□□□□□ -0.72
PTCH1-203ENST00000375274 CPT2P23786 658 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms