RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 METTL11BQ5VVY1 283 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 GFRALQ6UXV0 394 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 FAM71CQ8NEG0 241 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 RNF128Q8TEB7 428 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 PIGTQ969N2 578 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 RAB3CQ96E17 227 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 TIMD4Q96H15 378 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 NRIP3Q9NQ35 241 aa13.48□□□□□ -0.25
NDC1-201ENST00000371429 ARPC1BO15143 372 aaKnown RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 PIGAP37287 484 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 PRAMEF9Q5VWM5 478 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 SLC16A9Q7RTY1 509 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 BCDIN3DQ7Z5W3 292 aaKnown RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 WFDC8Q8IUA0 241 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 NTNG1Q9Y2I2 539 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ZNF891A8MT65 544 aaPredicted RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 SELENOFO60613 162 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 OPRL1P41146 370 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 RPP30P78346 268 aaKnown RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 SYT14P1Q58G82 188 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 SLC22A24Q8N4F4 322 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 CENPOQ9BU64 300 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 SDHAF2Q9NX18 166 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ATP23Q9Y6H3 246 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 IGLV3-16A0A075B6K0 115 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ZNF195O14628 629 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 TSPAN4O14817 238 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 MT-CO2P00403 227 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 HOXC4P09017 264 aaPredicted RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 FOLR1P15328 257 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ZNF93P35789 620 aaPredicted RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 MAP2K6P52564 334 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 FKRPQ9H9S5 495 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 EMC7Q9NPA0 242 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 TAS2R3Q9NYW6 316 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 PTTG1O95997 202 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 LIPCP11150 499 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 TAS2R46P59540 309 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 IL13RA1P78552 427 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 CATR1Q13166 79 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 HES3Q5TGS1 186 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 FCRL6Q6DN72 434 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 SLC22A25Q6T423 547 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 SFTPA1Q8IWL2 248 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ZNF683Q8IZ20 524 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 ZNF808Q8N4W9 903 aaPredicted RBP13.47□□□□□ -0.25
NDC1-201ENST00000371429 OR1L3Q8NH93 324 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 BCL2L10Q9HD36 194 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 LUZP4Q9P127 313 aa13.47□□□□□ -0.25
NDC1-201ENST00000371429 A0A1W2PQ09 198 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ADAM23O75077 832 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 SEC14L2O76054 403 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 GM2AP17900 193 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 SF3A2Q15428 464 aaKnown RBP13.46□□□□□ -0.25
NDC1-201ENST00000371429 ZMAT1Q5H9K5 638 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 COMTD1Q86VU5 262 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ENTHD1Q8IYW4 607 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 TMEM102Q8N9M5 508 aaPredicted RBP13.46□□□□□ -0.25
NDC1-201ENST00000371429 OR2T35Q8NGX2 323 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ZNF681Q96N22 645 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 OCSTAMPQ9BR26 566 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 EIF5A2Q9GZV4 153 aaKnown RBP13.46□□□□□ -0.25
NDC1-201ENST00000371429 ACKR4Q9NPB9 350 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ASH2LQ9UBL3 628 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 PIGLQ9Y2B2 252 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ARAP2Q8WZ64 1704 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ASXL3Q9C0F0 2248 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 A0A087WZY1 265 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 PLK5Q496M5 336 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 CPEB3Q8NE35 698 aaKnown RBP13.46□□□□□ -0.25
NDC1-201ENST00000371429 SLC22A11Q9NSA0 550 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 MLXQ9UH92 298 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 SLC22A20A6NK97 555 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ENSAO43768 121 aaKnown RBP13.46□□□□□ -0.25
NDC1-201ENST00000371429 BCKDHBP21953 392 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 CPT2P23786 658 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 OR1C1Q15619 314 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 AGAP6Q5VW22 663 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 BPIFB2Q8N4F0 458 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ARIH2OSQ8N7S6 290 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 RNF170Q96K19 258 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 ACER3Q9NUN7 267 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 SLC25A37Q9NYZ2 338 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 B3GALT5Q9Y2C3 310 aa13.46□□□□□ -0.25
NDC1-201ENST00000371429 CLDN24A6NM45 220 aa13.46□□□□□ -0.26
NDC1-201ENST00000371429 CEBPZOSA8MTT3 80 aa13.46□□□□□ -0.26
NDC1-201ENST00000371429 ZNF701M0R085 212 aaPredicted RBP13.46□□□□□ -0.26
NDC1-201ENST00000371429 IFNA17P01571 189 aa13.46□□□□□ -0.26
NDC1-201ENST00000371429 SNRPBP14678 240 aaKnown RBP13.46□□□□□ -0.26
NDC1-201ENST00000371429 F2RL1P55085 397 aa13.46□□□□□ -0.26
NDC1-201ENST00000371429 CAV3P56539 151 aa13.46□□□□□ -0.26
NDC1-201ENST00000371429 RPS25P62851 125 aaKnown RBP13.46□□□□□ -0.26
NDC1-201ENST00000371429 LAIR1Q6GTX8 287 aa13.46□□□□□ -0.26
NDC1-201ENST00000371429 SPRED2Q7Z698 418 aa13.46□□□□□ -0.26
NDC1-201ENST00000371429 DND1Q8IYX4 353 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms