RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 C20orf85Q9H1P6 137 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 FAM166BA8MTA8 275 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 TCRBP04435 133 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 TFAP2AP05549 437 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 OR13F1Q8NGS4 319 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 NIPAL2Q9H841 368 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 KLRC4-KLRK1H3BQV0 150 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 GLCEO94923 617 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 SCAF4O95104 1147 aaKnown RBP20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 SCGB1D1O95968 90 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 NPY4RP50391 375 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 TBC1D28Q2M2D7 210 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 CST9Q5W186 159 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 LPCAT3Q6P1A2 487 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 ADGRE4PQ86SQ3 457 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 LIPHQ8WWY8 451 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 C11orf54Q9H0W9 315 aaPredicted RBP20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 RBFOX1Q9NWB1 397 aaKnown RBP20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 CYB561P49447 251 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 RAB5CP51148 216 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 HTR4Q13639 388 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 CPEB2Q7Z5Q1 589 aaKnown RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 OR10K1Q8NGX5 313 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 TMEM174Q8WUU8 243 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 Q96M85 177 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 ATP13A2Q9NQ11 1180 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 CHD4Q14839 1912 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 ZC3H12DA2A288 527 aaKnown RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 NKX6-3A6NJ46 265 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 H0Y8X5 98 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 ABLIM3O94929 683 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 FOLR1P15328 257 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 MMP11P24347 488 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 RACK1P63244 317 aaKnown RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 PRSS45Q7RTY3 260 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 ADGRF3Q8IZF5 1079 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 SLC37A2Q8TED4 501 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 EMG1Q92979 244 aaKnown RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 UBQLN3Q9H347 655 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 ETV7Q9Y603 341 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 CD1CP29017 333 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 TESK1Q15569 626 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 TRMT12Q53H54 448 aaKnown RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 CCDC71Q8IV32 467 aaPredicted RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 FUNDC1Q8IVP5 155 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 OR1E3Q8WZA6 343 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 MGST1P10620 155 aaKnown RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 ETV6P41212 452 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 SRP9P49458 86 aaKnown RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 RAB11AP62491 216 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 HES1Q14469 280 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 DUSP5Q16690 384 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 GLYR1Q49A26 553 aaPredicted RBP20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 TPPP3Q9BW30 176 aa20.37■□□□□ 0.85
TM9SF3-201ENST00000371142 IGLV3-10A0A075B6K4 115 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 SLC5A10A0PJK1 596 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 TPOP07202 933 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 S100A7P31151 101 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 IRS1P35568 1242 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 FAM109AQ8N4B1 249 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 THOC3Q96J01 351 aaKnown RBP20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 PBX4Q9BYU1 374 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 NECAP2Q9NVZ3 263 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 ZNF891A8MT65 544 aaPredicted RBP20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 ACOT8O14734 319 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 OR5AS1Q8N127 324 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 POFUT1Q9H488 388 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 PPT2Q9UMR5 302 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 HS3ST3A1Q9Y663 406 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 FCN2Q15485 313 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 ZMAT1Q5H9K5 638 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 RBMS3Q6XE24 437 aaKnown RBP20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 NKAIN4Q8IVV8 208 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 NAXDQ8IW45 347 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 C3orf49Q96BT1 292 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 LANCL2Q9NS86 450 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 NTNG1Q9Y2I2 539 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 GABARAPH6UMI1 98 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 GABARAPO95166 117 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 MAP2K6P52564 334 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 RAB22AQ9UL26 194 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 ANKRD12Q6UB98 2062 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 HS3ST1O14792 307 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 RUNX2Q13950 521 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 H1FNTQ75WM6 255 aaPredicted RBP20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 ANGPTL5Q86XS5 388 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 BANF2Q9H503 90 aa20.36■□□□□ 0.85
TM9SF3-201ENST00000371142 TSTD3H0UI37 97 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 TRHRP34981 398 aaPredicted RBP20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 OVCH1Q7RTY7 1134 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 EMC6Q9BV81 110 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 ZNF732B4DXR9 585 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 NRG2O14511 850 aaPredicted RBP20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 AADACP22760 399 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 CD27P26842 260 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 ADPRMQ3LIE5 342 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 HSF5Q4G112 596 aaPredicted RBP20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 TERB2Q8NHR7 220 aa20.35■□□□□ 0.85
TM9SF3-201ENST00000371142 C6orf106Q9H6K1 298 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms