RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 HSPB2A8KAH6 182 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 CD46P15529 392 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 PPP3CBP16298 524 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 HIST1H1CP16403 213 aaKnown RBP10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 EPHA4P54764 986 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 RUNX2Q13950 521 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 HSPB2Q16082 182 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 EXT1Q16394 746 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 Q6ZTK2 550 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 CREB3L2Q70SY1 520 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ARIH2OSQ8N7S6 290 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 OR1S1Q8NH92 325 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 RADILQ96JH8 1075 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ASCC3Q8N3C0 2202 aaKnown RBP10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF44P15621 663 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ACHEP22303 614 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 EVI2BP34910 448 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 SORDQ00796 357 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 GPR157Q5UAW9 335 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 MEX3BQ6ZN04 569 aaKnown RBP10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 MOB3CQ70IA8 216 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 LINC00346Q8IVM7 164 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 GJC3Q8NFK1 279 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 C16orf52Q8NHV5 167 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC35B4Q969S0 331 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 DCBLD2Q96PD2 775 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 CSF3RQ99062 836 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 GALNT9Q9HCQ5 603 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 MED16Q9Y2X0 877 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 P2RY10O00398 339 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 SURF4O15260 269 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 GPR137BO60478 399 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 OR7C1O76099 320 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 VAMP5O95183 116 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 AQP6Q13520 282 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 GDPD3Q7L5L3 318 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 BOLLQ8N9W6 283 aaKnown RBP10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 MIB2Q96AX9 1013 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 OR5B12Q96R08 314 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 MED18Q9BUE0 208 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ACKR4Q9NPB9 350 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 NTNG1Q9Y2I2 539 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 ADAM18Q9Y3Q7 739 aa10.87□□□□□ -0.67
DEPDC1-201ENST00000370966 E9PI62 339 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 HOXB5P09067 269 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 FCGR2AP12318 317 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 BLVRBP30043 206 aaPredicted RBP10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 CDC20Q12834 499 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF684Q5T5D7 378 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 NPSR1Q6W5P4 371 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 FAM109AQ8N4B1 249 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 HMGCLL1Q8TB92 370 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 MICU1Q9BPX6 476 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 KCNJ16Q9NPI9 418 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 PRDM7Q9NQW5 492 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 SEC16AO15027 2179 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 SMCO3A2RU48 225 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 TMEM221A6NGB7 291 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 OR6C76A6NM76 312 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 M0R082 166 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 TMEM127O75204 238 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC34A2O95436 690 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 PMS2P2O95744 297 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 EVX1P49640 407 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 GRB2P62993 217 aaKnown RBP10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 C1QTNF12Q5T7M4 302 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 DCXRQ7Z4W1 244 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 KIAA0907Q7Z7F0 614 aaPredicted RBP10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 ARL5BQ96KC2 179 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 MRGPRX3Q96LB0 322 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 AKIP1Q9NQ31 210 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 ACOXLQ9NUZ1 547 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 CD300LBA8K4G0 201 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 SULT1C2O00338 296 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 ITGB2P05107 769 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 ELK1P19419 428 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 CTF1Q16619 201 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 RPS19BP1Q86WX3 136 aaKnown RBP10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 FGGYQ96C11 551 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 UTP23Q9BRU9 249 aaKnown RBP10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 TMEM43Q9BTV4 400 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC25A31Q9H0C2 315 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 OCEL1Q9H607 264 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 GAREM1Q9H706 876 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 KIAA1217Q5T5P2 1943 aa10.86□□□□□ -0.67
DEPDC1-201ENST00000370966 SSX5O60225 188 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC2A10O95528 541 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 CD160O95971 181 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 HYAL4Q2M3T9 481 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF679Q8IYX0 411 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 MORN4Q8NDC4 146 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 SMIM19Q96E16 107 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 SCPEP1Q9HB40 452 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 COA3Q9Y2R0 106 aaPredicted RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 IDSB3KWA1 339 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF780AO75290 641 aaPredicted RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 CISD3P0C7P0 127 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 SRFP11831 508 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 HMGA2P52926 109 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms